From: The functional role of long non-coding RNA in human carcinomas
Type | Subclasses | Symbol | References |
---|---|---|---|
Transfer RNAs | tRNAs | [222] | |
MicroRNAs | miRNAs | [33, 34] | |
Ribosomal 5S and 5.8S RNAs | rRNAs | [223, 224] | |
Piwi interacting RNAs | piRNAs | [38, 225] | |
Tiny transcription initiation RNAs | tiRNAs | [39, 40] | |
Small interfering RNAs | siRNA | [32] | |
Promoter-associated short RNAs | PASRs | [144, 149] | |
Termini-associated short RNAs | TASRs | [144, 149] | |
Antisense termini associated short RNAs | aTASRs | [226] | |
Small ncRNA (18 to 200 nt in size) | Small nucleolar RNAs | snoRNAs | [227, 228] |
Transcription start site antisense RNAs | TSSa-RNAs | [229] | |
Small nuclear RNAs | snRNAs | [230] | |
Retrotransposon-derived RNAs | RE-RNAs | [231, 232] | |
3'UTR-derived RNAs | uaRNAs | [145] | |
x-ncRNA | x-ncRNA | [233] | |
Human Y RNA | hY RNA | [234] | |
Unusually small RNAs | usRNAs | [235] | |
Small NF90-associated RNAs | snaRs | [236, 237] | |
Vault RNAs | vtRNAs | [238] | |
Ribosomal 18S and 28S RNAs | rRNAs | [223, 224] | |
Long or large intergenic ncRNAs | lincRNAs | [8, 58] | |
Transcribed ultraconserved regions | T-UCRs | [85] | |
Pseudogenes | none | [239, 240] | |
GAA-repeat containing RNAs | GRC-RNAs | [241] | |
Long ncRNA (lncRNAs, 200 nt to >100 kb in size) | Long intronic ncRNAs | none | [242, 243] |
Antisense RNAs | aRNAs | [244] | |
Promoter-associated long RNAs | PALRs | [144, 149] | |
Promoter upstream transcripts | PROMPTs | [245] | |
Stable excised intron RNAs | none | [56] | |
Long stress-induced non-coding transcripts | LSINCTs | [25] |