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Table 3 Descriptives of the CpG sites from the 27K methylation array

From: The RASSF gene family members RASSF5, RASSF6 and RASSF7 show frequent DNA methylation in neuroblastoma

   

Methylation frequency (beta-value)

 

Gene

ILMNIDa

Relation to CGI

Mean

Range

RASSF1

cg00777121

CGI

0.69

0.13-0.95

 

cg06063729

CGI

0.02

0-0.05

 

cg06821120

CGI

0.12

0.02-0.64

 

cg06980053

CGI

0.20

0.06-0.59

 

cg08047457

CGI

0.75

0.05-0.99

 

cg11035216

CGI

0.02

0-0.03

 

cg15043975

CGI

0.06

0.04-0.11

 

cg21554552

CGI

0.61

0.04-0.96

 

cg26357744

CGI

0.01

0-0.04

RASSF2

cg16884569

CGI

0.01

0-0.03

 

cg19614321

CGI shore

0.06

0.01-0.27

RASSF3

cg07915282

CGI

0.02

0-0.07

 

cg12157010

CGI

0.01

0-0.02

RASSF4

cg13603099

CGI shore

0.01

0-0.02

 

cg17324128

CGI

0.10

0.04-0.24

RASSF5

cg01860753

CGI

0.18

0.04-0.38

 

cg02589695

CGI

0.23

0.06-0.51

 

cg08617916

CGI

0.01

0-0.02

 

cg10167296

CGI

0.04

0.02-0.1

 

cg17558126

CGI

0.13

0.03-0.43

 

cg19452316

CGI

0.04

0-0.08

 

cg22857604

CGI

0.04

0-0.1

 

cg23520347

CGI

0.05

0.01-0.09

 

cg24450312

CGI

0.09

0.02-0.16

RASSF6

cg03996822

CGI shore

0.39

0-0.94

 

cg08647446

CGI

0.12

0.05-0.54

RASSF7

cg14896003

CGI shore

0.96

0.89-1.0

RASSF8

cg07469792

CGI

0.01

0-0.03

 

cg22946876

CGI

0.00

0-0.03

  1. ILMNID, Illumina ID; CGI, CpG island.
  2. a http://www.illumina.com/Documents/products/technotes/technote_cpg_loci_identification.pdf