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Table 4 GSEA summary of pathways associated with genes up regulated in IGFBP2 positive tumors

From: Regulation of protumorigenic pathways by Insulin like growth factor binding protein2 and its association along with β-catenin in breast cancer lymph node metastasis

NAME

SIZE

NOM p-val

FDR q-val

FWER p-val

KEGG_MAPK_SIGNALING_PATHWAY

43

0

0

0

KEGG_LEISHMANIA_INFECTION

20

0

0

0

KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION

35

0

0.007717

0.013

KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS

19

0.001976

0.006687

0.015

KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY

19

0.00211

0.016915

0.045

KEGG_FOCAL_ADHESION

30

0.007619

0.025984

0.084

KEGG_COMPLEMENT_AND_COAGULATION_CASCADES

16

0.015968

0.023016

0.087

KEGG_ECM_RECEPTOR_INTERACTION

15

0.002053

0.022288

0.096

KEGG_CHEMOKINE_SIGNALING_PATHWAY

32

0.008403

0.020502

0.1

KEGG_APOPTOSIS

20

0.008584

0.018452

0.1

KEGG_VIRAL_MYOCARDITIS

17

0.005906

0.017723

0.105

KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY

27

0.028902

0.037213

0.228

KEGG_GNRH_SIGNALING_PATHWAY

19

0.044444

0.113272

0.563

KEGG_CELL_ADHESION_MOLECULES_CAMS

26

0.095808

0.195608

0.805

KEGG_ALZHEIMERS_DISEASE

24

0.087302

0.183226

0.805

KEGG_PATHWAYS_IN_CANCER

48

0.098

0.185527

0.831

KEGG_AXON_GUIDANCE

17

0.11553

0.176978

0.834

KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION

24

0.136538

0.210733

0.893

KEGG_DILATED_CARDIOMYOPATHY

15

0.165339

0.237117

0.925

KEGG_NEUROTROPHIN_SIGNALING_PATHWAY

19

0.168932

0.240447

0.932

KEGG_MELANOGENESIS

15

0.252033

0.367091

0.99

KEGG_LYSOSOME

18

0.329389

0.436596

0.996

KEGG_CALCIUM_SIGNALING_PATHWAY

19

0.367886

0.427407

0.996

KEGG_WNT_SIGNALING_PATHWAY

24

0.361616

0.414545

0.996

KEGG_ENDOCYTOSIS

20

0.365503

0.423908

0.998

KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION

15

0.419958

0.454951

0.999

KEGG_HUNTINGTONS_DISEASE

18

0.568465

0.60777

1

KEGG_REGULATION_OF_ACTIN_CYTOSKELETON

29

0.74269

0.769736

1

KEGG_PURINE_METABOLISM

20

0.933054

0.931545

1

  1. NOM P nominal P value.