Table 1 Probsets associated with T CD8 + leukemias
From: Characterization and identification of PARM-1 as a new potential oncogene
ProbesetIDs | T1-CT | T2-CT | T3-CT | B1-CT | B2-CT | B3-CT | Gene Title | Gene Symbol |
|---|---|---|---|---|---|---|---|---|
* | * | * | * | * | * | |||
T CD8+ overexpressed genes | ||||||||
1420692_at | 5,83 | 5,52 | −0,02 | −0,21 | 0,12 | 0,52 | interleukin 2 receptor, alpha chain | Il2ra |
1456645_at | 5,75 | 5,21 | 0,85 | −0,23 | −0,14 | −0,14 | WD repeat domain 25 | Wdr25 |
1435436_at | 5,70 | 5,77 | 0,77 | −0,02 | −0,05 | 0,28 | Transcribed locus | — |
1427802_a_at | 5,63 | 7,13 | −0,14 | 0,53 | −0,22 | −0,33 | — | — |
1436970_a_at | 5,35 | 7,13 | 0,87 | 0,22 | −0,73 | 0,01 | platelet derived growth factor receptor, beta polypeptide | Pdgfrb |
1428420_a_at | 4,88 | 4,98 | −0,12 | −0,19 | −0,42 | −0,19 | RIKEN cDNA 1200009I06 gene | Exoc3l4 |
1419302_at | 4,39 | 4,77 | 0,10 | 0,65 | 0,51 | 0,17 | hairy/enhancer-of-split related with YRPW motif-like | Heyl |
1440808_x_at | 4,20 | 3,61 | 0,02 | −0,62 | −0,45 | −0,58 | CD163 molecule-like 1 | Cd163l1 |
1420691_at | 4,19 | 4,39 | −0,17 | −0,10 | 0,12 | 0,45 | interleukin 2 receptor, alpha chain | Il2ra |
1424214_at | 4,07 | 4,78 | 0,28 | −0,62 | −0,93 | −0,83 | RIKEN cDNA 9130213B05 gene (prostate androgen-regulated mucin-like protein 1) | 9130213B05Rik (Parm-1 |
1459461_at | 4,04 | 5,39 | 0,24 | 0,54 | 0,67 | 0,44 | — | — |
1428891_at | 4,01 | 4,27 | 0,29 | −0,22 | −0,18 | −0,26 | RIKEN cDNA 9130213B05 gene (prostate androgen-regulated mucin-like protein 1) | 9130213B05Rik (Parm-1 |
1460294_at | 3,84 | 4,65 | 0,16 | −0,20 | −0,20 | 0,15 | ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 | Atp8a2 |
1440156_s_at | 3,84 | 3,80 | 0,51 | −0,13 | −0,28 | −0,35 | TOX high mobility group box family member 2 | Tox2 |
1435494_s_at | 3,76 | 7,29 | 0,37 | 0,07 | −0,12 | 0,00 | desmoplakin | Dsp |
1455527_at | 3,59 | 3,34 | 0,29 | −0,25 | −0,30 | −0,16 | CD163 molecule-like 1 | Cd163l1 |
1444696_at | 3,34 | 3,50 | −0,04 | 0,22 | −0,15 | 0,18 | Transcribed locus, weakly similar to NP_001311.3 casein kinase 2, beta polypeptide [Homo sapiens] | |
1421173_at | 3,33 | 2,23 | 0,17 | −0,63 | −0,10 | −0,60 | interferon regulatory factor 4 | Irf4 |
1440627_at | 3,31 | 5,10 | 0,10 | −0,19 | −0,49 | −0,47 | ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 | Atp8a2 |
1446224_at | 3,22 | 3,00 | 0,97 | −0,13 | −0,26 | −0,26 | HECT domain containing 2 | Hectd2 |
1438886_at | 3,12 | 3,09 | 0,29 | −0,03 | −0,22 | 0,13 | hairy/enhancer-of-split related with YRPW motif-like | Heyl |
1459219_at | 3,09 | 5,30 | −0,36 | 0,32 | 0,51 | 0,14 | RIKEN cDNA B930012P20 gene | Rapgef2 |
1426922_s_at | 3,06 | 3,55 | 0,45 | 0,25 | 0,63 | 0,12 | HIV-1 Rev binding protein | Hrb |
1433906_at | 3,01 | 5,03 | 0,00 | −0,01 | −0,05 | 0,10 | Clavesin 1 | Clvs1 |
1450897_at | 2,81 | 3,83 | −0,62 | −0,44 | −0,62 | −0,46 | expressed sequence AU014947 | AU014947 |
1451348_at | 2,74 | 4,18, | −0,55 | 0,77 | 0,58 | 0,38 | DEP domain containing 6 | Depdc6 |
1452237_at | 2,71 | 3,29 | 0,38 | −0,11 | 0,15 | −0,02 | HIV-1 Rev binding protein | Hrb |
1440870_at | 2,56 | 3,69 | −0,33 | 0,01 | 0,00 | 0,10 | PR domain containing 16 | Prdm16 |
1426923_at | 2,46 | 2,90 | 0,14 | −0,07 | 0,23 | −0,01 | HIV-1 Rev binding protein | Hrb |
1421508_at | 2,45 | 2,02 | −0,78 | −0,44 | −0,63 | −0,28 | odd Oz/ten-m homolog 1 (Drosophila) | Odz1 |
1424814_a_at | 2,45 | 2,31 | 0,59 | −0,41 | −0,60 | −0,95 | Bcl2-like 14 (apoptosis facilitator) | Bcl2l14 |
1452238_at | 2,44 | 3,31 | 0,09 | 0,24 | 0,28 | −0,04 | HIV-1 Rev binding protein | Hrb |
1423194_at | 2,43 | 2,44 | −0,27 | −0,89 | −0,57 | −0,68 | — | — |
1441548_at | 2,39 | 2,76 | −0,23 | 0,04 | −0,21 | −0,25 | FERM domain containing 4B | Frmd4b |
1456956_at | 2,36 | 3,95 | 0,56 | −0,31 | −0,59 | −0,94 | IKAROS family zinc finger 2 | Ikzf |
1434186_at | 2,29 | 2,86 | −0,40 | 0,00 | −0,08 | 0,18 | G protein-coupled receptor 23 | Gpr23 |
1428622_at | 2,23 | 3,86 | 0,08 | 0,66 | 0,66 | 0,75 | DEP domain containing 6 | Depdc6 |
1455449_at | 2,19 | 4,11 | −0,22 | 0,17 | 0,33 | 0,18 | RIKEN cDNA 2010107G12 gene | Gm468 |
1423666_s_at | 2,13 | 2,18 | 0,90 | 0,82 | 0,88 | 0,35 | ribosomal protein L5 | Rpl5 |
1430029_a_at | 2,04 | 2,22 | −0,44 | 0,31 | 0,24 | 0,24 | sarcoma amplified sequence | Sas |
1437542_at | 2,02 | 2,39 | 0,87 | 0,38 | 0,21 | −0,15 | IKAROS family zinc finger 2 | Ikzf2 |
1427132_at | 2,00 | 2,18 | 0,42 | −0,62 | −0,36 | −0,81 | myotubularin related protein 13 | Mtmr13 |
T CD8+ underexpressed genes | ||||||||
1433769_at | −2,00 | −4,28 | 0,03 | −0,21 | −0,26 | −0,31 | ALS2 C-terminal like | Als2c |
1424338_at | −2,20 | −2,20 | 0,62 | −0,16 | −0,98 | 0,20 | solute carrier family 6 (neurotransmitter transporter, GABA), member 13 | Slc6a13 |
1420918_at | −3,43 | −2,50 | −0,26 | −0,72 | 0,07 | −0,01 | serum/glucocorticoid regulated kinase 3 | Sgk3 |
1450455_s_at | −3,49 | −3,04 | −0,73 | −0,29 | −0,22 | 0,09 | aldo-keto reductase family 1, member C12 /// aldo-keto reductase family 1, member C13 | Akr1c12 /// Akr1c13 |
1420919_at | −3,54 | −2,36 | −0,18 | −0,01 | 0,44 | 0,49 | serum/glucocorticoid regulated kinase 3 | Sgk3 |
1450853_at | −3,59 | −2,77 | 0,36 | 0,28 | 0,04 | 0,74 | transducin-like enhancer of split 4, homolog of Drosophila E(spl) | Tle4 |
1452657_at | 4,09 | 2,04 | 0,29 | 0,17 | −0,67 | −0,87 | adaptor-related protein complex 1, sigma 2 subunit | Ap1s2 |
1450700_at | −4,12 | −2,08 | −0,86 | 0,64 | 0,28 | 0,70 | CDC42 effector protein (Rho GTPase binding) 3 | Cdc42ep3 |