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Table 2 Candidate miR-16 targets predicted by TargetScan, PicTar and miRanda

From: The identification of novel targets of miR-16 and characterization of their biological functions in cancer cells

Gene name

TargetScan

PicTar

miRanda

Result

ARL2

4

5

1

Positive

CDS2

2

2

1

Positive

ANAPC13

1

0

0

 

NUPL1

0

0

0

 

MAP7

2

2

2

Positive

ARG2

0

0

0

 

RTN4

1

0

1

Positive

RARS

0

0

0

 

PRDM4

1

1

1

Positive

SPRYD3

4

0

2

Positive

ATF6

1

0

1

Positive

TMEM109

2

0

2

Positive

RPS6KA3

2

0

1

Positive

BCR

1

1

1

Positive

KIF3B

1

0

1

Positive

ENTPD6

2

0

0

 

CCND3

2

0

1

Positive

ARHGDIA

4

5

1

Positive

GABARAPL1

3

0

2

Positive

PLEKHB2

2

0

0

 

FLJ11149

0

0

0

 

DNAJC5

2

0

0

 

ZNF622

1

1

1

Positive

ANXA11

1

0

1

Positive

VPS33B

2

0

1

Positive

ANLN

1

0

1

Positive

PTH2

0

0

0

 
  1. Numbers in the table indicate the putative binding sites of miR-16 in the 3′-UTR of target genes.