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Table 5 Comparison of gene coverage between the custom gene chip and the Affymetrix™ Exon Array

From: A dedicated microarray for in-depth analysis of pre-mRNA splicing events: application to the study of genes involved in the response to targeted anticancer therapies

Gene

Custom array (present study)

Affymetrix™ Exon array

 

Nb probes (exonic/junction)

Average probe length (bp)

Nb probes (exonic/junction)

Average probe length (bp)

HIF1A

123 (85/38)

42.4

80 (80/0)

25.0

VEGFA

90 (64/26)

42.3

60 (60/0)

25.0

  1. The numbers of probes and their average length are shown for both the HIF1A and VEGFA genes.