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Table I Endothelial cell genes (ECG) detected by SSHDD. BLAST searches revealed similarity to the accession # provided on the right most column. Genbank accession number in bold letter denotes complete cDNA sequence deposited by the authors.

From: Analysis of VEGF-responsive Genes Involved in the activation of endothelial cells

Class of genes

Gen Bank Accession Number

Reference

Known Genes associated with the activation of endothelial cells

Matrix metalloproteinases-1 (MMP-1)

X54925

3,25,26

Matrix metalloproteinases-2 (MMP2)

NM_ 004530

3,25,26

Stromelysin (MMP-3)

X05232

2,3,25

Type IV collagenase (MMP9)

J05070

2,3,26

Myeloblastin

M75154

25,26

Cathepsin B

M14221

28

Calpastatin

E02261

29

Urokinase plasminogen activator surface receptor (uPAR)

X51675

2,30

Vascular endothelial growth factor receptor (VEGFR1/FLT-1)

AF063657

4,5

Vascular endothelial growth factor receptor-2(VEGFR-2/KDR)

X61656

4,5,6

Vascular cell adhesion molecule-1 (VCAM-1)

X53051

2,3

α2 integrin subunit

X17033

2,20

VE-cadherin

X79981

2,3,21

Prostaglandin endoperoxidase (Cox)

E03346

2,32

Metabolic and miscellaneous genes

Ketohexokinase

P50053

-

Adenosine deaminase

X02994

-

Spermidine synthase

M64231

-

Adenylyl cyclase

X74210

33

Platelet factor 4 (PF4)

M25897

34

Stanniocalcin

U25997

35,36

Candidate genes associated with the activation of endothelial cells

Clone 7D Kinesin-heavy chain (KHC)

X65873

37

Clone 17E Epiregulin (Epireg)

NM_001432

38

Clone 22G Similar to transcription factor BTF3

XM_038290

40

Clone 33A Phosphatidic acid phosphatase-2b (PAP2b/VCIP)

AB000889/AF480883

40,41

Clone 37F Synaptojanin-2 (similar to KIAA0348 protein)

AB002346

42,43

Clone 48A Similar to GPCR kinase-interactor-2 (GIT-2)

NM_014776

44

Clone 54C Smg GDS-associated protein (SMAP)

AI401257/U59919

45

Clone 77D Angiopoietin related protein (AngRP)

AF169312

46

Clone 94H Similar to Ribosomal protein L19 (RibL19)

AB019566/BC013016

47,48

Clone 263F Eukaryotic translation EF-1 alpha l(EF-lal)

BC028674

49

Clone 309C Stabilin-1

NM_015136

50