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Table I Endothelial cell genes (ECG) detected by SSHDD. BLAST searches revealed similarity to the accession # provided on the right most column. Genbank accession number in bold letter denotes complete cDNA sequence deposited by the authors.

From: Analysis of VEGF-responsive Genes Involved in the activation of endothelial cells

Class of genes Gen Bank Accession Number Reference
Known Genes associated with the activation of endothelial cells
Matrix metalloproteinases-1 (MMP-1) X54925 3,25,26
Matrix metalloproteinases-2 (MMP2) NM_ 004530 3,25,26
Stromelysin (MMP-3) X05232 2,3,25
Type IV collagenase (MMP9) J05070 2,3,26
Myeloblastin M75154 25,26
Cathepsin B M14221 28
Calpastatin E02261 29
Urokinase plasminogen activator surface receptor (uPAR) X51675 2,30
Vascular endothelial growth factor receptor (VEGFR1/FLT-1) AF063657 4,5
Vascular endothelial growth factor receptor-2(VEGFR-2/KDR) X61656 4,5,6
Vascular cell adhesion molecule-1 (VCAM-1) X53051 2,3
α2 integrin subunit X17033 2,20
VE-cadherin X79981 2,3,21
Prostaglandin endoperoxidase (Cox) E03346 2,32
Metabolic and miscellaneous genes
Ketohexokinase P50053 -
Adenosine deaminase X02994 -
Spermidine synthase M64231 -
Adenylyl cyclase X74210 33
Platelet factor 4 (PF4) M25897 34
Stanniocalcin U25997 35,36
Candidate genes associated with the activation of endothelial cells
Clone 7D Kinesin-heavy chain (KHC) X65873 37
Clone 17E Epiregulin (Epireg) NM_001432 38
Clone 22G Similar to transcription factor BTF3 XM_038290 40
Clone 33A Phosphatidic acid phosphatase-2b (PAP2b/VCIP) AB000889/AF480883 40,41
Clone 37F Synaptojanin-2 (similar to KIAA0348 protein) AB002346 42,43
Clone 48A Similar to GPCR kinase-interactor-2 (GIT-2) NM_014776 44
Clone 54C Smg GDS-associated protein (SMAP) AI401257/U59919 45
Clone 77D Angiopoietin related protein (AngRP) AF169312 46
Clone 94H Similar to Ribosomal protein L19 (RibL19) AB019566/BC013016 47,48
Clone 263F Eukaryotic translation EF-1 alpha l(EF-lal) BC028674 49
Clone 309C Stabilin-1 NM_015136 50