Table 1 On-line Resources

Nucleotide Sequence

http://www.ncbi.nlm.nih.gov/

NCBI – GenBank

http://www.ebi.ac.uk/embl.html

EMBL-EBI – Nucleotide Sequence Database

http://www.ddbj.nig.ac.jp

DNA Data Bank of Japan

Transcript

http://www.ncbi.nlm.nih.gov/UniGene/

NCBI – UniGene

http://mcb.harvard.edu/gilbert/EID/

The Exon-Intron Database

http://www.ncbi.nlm.nih.gov/RefSeq/

NCBI – Reference Sequence

http://genome.ucsc.edu/

UC – Santa Cruz – Genome Bioinformatics

Protein

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Protein

NCBI – Entrez-Protein

http://pir.georgetown.edu/

Protein Information Resource

http://www.expasy.org/sprot

Swiss-Prot

http://www.expasy.org/prosite

PROSITE

http://www.ebi.ac.uk/proteome/

EMBL-EBI – Proteome Analysis

http://www.expasy.org/ch2d/

Swiss-2DPAGE

2. Signalling Pathways

http://www.geneontology.org/

Gene Ontology Consortium

http://www.genome.ad.jp/kegg

Kyoto Encyclopedia of Genes and Genomes

http://www.biocarta.com/

BioCarta

3. Human and non-human vertebrate genomes

http://www.tigr.org/tdb/tgi.shtml

The Institute for Genomic Research Gene Indices

http://genome.ucsc.edu/

UC – Santa Cruz – Genome Bioinformatics

http://www.sanger.ac.uk/HGP/

The Sanger Institute: Human Genome Project

http://www.ensembl.org/

Ensembl Genome Browser

http://genome.wustl.edu/

Washington U St. Louis Genome Sequencing Center

http://www.ncbi.nlm.nih.gov/LocusLink

NCBI – LocusLink

http://www.gdb.org/

The Genome Database

http://www.ncbi.nlm.nih.gov/SNP/

NCBI – Single Nucleotide Polymorphism database

http://www.genelynx.org

GeneLynx

http://www.ncbi.nih.gov/IEB/Research/Acembly/index.html

NCBI – Acembly/AceView

http://gai.nci.nih.gov/html-snp/imagemaps.html

NCI-CGAP – Comprehensive SNP Imagemaps

http://www.informatics.jax.org/

Mouse Genome Informatics

http://rgd.mcw.edu/

Rat Genome Database

http://genome.jgi-psf.org/fugu6/fugu6.home.html

Doe Joint Genome Institute (Fugu genome resource)

4. Human Genes and Diseases

http://Bioinfo.weizmann.ac.il/cards/

GeneCards™

http://www.ncbi.nlm.nih.gov/Omim/

NCBI – Online Mendelian Inheritance in Man

5. Microarray and Gene Expression Databases

SAGE

http://www.sagenet.org/

SAGEnet

http://www.ncbi.nlm.nih.gov/SAGE/

NCBI – SAGEmap

http://cgap.nci.nih.gov/SAGE

NCI-CGAP – SAGE Genie

Microarray

http://www.ebi.ac.uk/arrayexpress

EMBL-EBI – ArrayExpress

http://bodymap.ims.u-tokyo.ac.jp/

BODYMAP

http://hugeindex.org/

Human Gene Expression Index

http://genome-www5.stanford.edu

Stanford Microarray Database

http://www.longhornarraydatabase.org/

Longhorn Array Database

6. Cytogenetics

http://www.wiley.com/legacy/products/subject/life/mitelman/

Mitelman's Catalog of Chromosome Aberrations in Cancer

http://www.ncbi.nlm.nih.gov/sky/skyweb.cgi

NCBI – SKY/M-FISH GH Database

http://amba.charite.de/cgh/

Charité – Comparative Genomic Hybridization

http://www.infobiogen.fr/services/chromcancer/

Atlas Chromosomes in Cancer

http://www.progenetix.net/

Progenetix – Online CGH Database

http://www.helsinki.fi/cmg/

Laboratory of Cytomolecular Genetics (CMG)

7. Molecular Cancer Sites

http://cgap.nci.nih.gov/

NCI-CGAP (Cancer Genome Anatomy Project)

The Tumor Gene Database