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Table 1 Identities of selected cDNA clones present in subtracted libraries

From: Screening and identification of differentially expressed transcripts in circulating cells of prostate cancer patients using suppression subtractive hybridization

Clone I.D.

GenBank Accession No.

Gene Description

PCa-001*

AC026205

Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence

PCa-002

AC019106

Homo sapiens BAC clone RP11-479L11 from 2, complete sequence

PCa-004

AY341247.1

Homo sapiens integral membrane protein 2B (ITM2B) gene, complete cds

PCa-005

AC104771.4

Homo sapiens BCA clone RP11-1E1 from 4, complete sequence

PCa-006

AC132068

Homo sapiens chromosome 16 clone CTD-2326c4, complete sequence

PCa-007

AK091994

Home sapiens cDNA FLJ34675 fis, clone Liver2001608

PCa-008

AC092910.9

Homo sapiens 3 BAC Rp11-767L7 (Roswell Park Cancer institute human BCA Library)

PCa-009

AC004690.2

Homo sapiens PAC clone RP-630c24 from 7, complete sequence

PCa-010

AC097461

Homo sapiens bCA clone RP11-6P6 from 2, complete sequence

PCa-011

BC047553

Homo sapiens calmodulin 2 mRNA (phosphorylase kinase δ)

PCa-012

AL031274

Homo sapiens chromosome 1q24 (clone RP4-798A17) contains the 3' part of the FMO1 gene and the FMO4 gene

PCa-013

AC010369

Homo sapiens chromosome 5 (clone CTC-2048F20)

PCa-014

NG_002397

Homo sapiens major histocompatibility complex, class I, BC (HLA-BC)

PCa-015

BC016320

Homo sapiens cathepsin D (Lysosomal aspartyl protease) mRNA

PCa-016

AC021701

Homo sapiens chromosome 18 (clone RP11-704G7)

Nrml-001**

AC004914.1

Homo sapiens PCA clone RP5-88608 from 7, complete sequence

Nrml-002

AK095899.1

Homo sapiens cDNA FLJ38580 fis, clone HCHON2008582, highly similar to ferritin heavy chain

Nrml-003

AC006083

Homo sapiens chromosome 17, clone hRPK.1053_B_8, complete sequence

Nrml-004

AL109759.4

Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence

Nrml-005

AK026823.1

Homo sapiens cDNA: FLJ23170 fis, clone LNG09984

Nrml-006

AC019335.5

Homo sapiens chromosome 8, clone RP11-453N18, complete sequence

Nrml-007

AL162252.17

Human DNA sequence from clone RP11-55J24 on chromosome 9, complete sequence

Nrml-008

AC016644.9

Homo sapiens chromosome 5 clone RP11-52M14, complete sequence

  1. * PCa clones were selected from the subtracted cDNA library that represents mRNA species only present in circulating cells of PCa patients.
  2. ** Nrml clones were selected from the subtracted cDNA library that represents mRNA species absent in circulating cells of PCa patients but present in their counterparts in cancer-free healthy men.