Comparison of microRNA expression in PC3 and LNCaP cells by microarray analysis. A heat map of replicate experiments (N = 6) that displays the relative Cy3/Cy5 ratios of microRNAs expressed in PC3(Cy3) vs.LNCaP(Cy5) cells. Expression levels on individual arrays were calculated by averaging the duplicate spots for each miRNA. MicroRNAs are listed in order of significance as determined by SAM analysis. MicroRNA expression is displayed as higher (red) or lower (green) in LNCaP cells in comparison to PC3 cells.