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Table 3 Expression in Islands frequently amplified in CRC.

From: A genome-wide map of aberrantly expressed chromosomal islands in colorectal cancer

chromosomal region fraction of patients congruence with our expression data CGH study
1   no [18]
1q21 57% no [21]
3p25.2 30% yes [25]
3q26.31 32% no [25]
6p12.1 24% no [25]
7 46% yes [17, 18, 25]
7p > 35% yes [23]
7p 42% yes [19]
7p22.3 57% yes [25]
7q 42% yes [19]
7q > 35% yes [23]
7q11.2-7q12 75% 7q11.23-7q21.3 [21, 24]
8q   yes [17]
8q 27% yes [18, 25]
8q 42% yes [23]
8q24 57% yes [21]
8q24.21 40% yes [25]
8q24.22 30% yes [25]
8q24.3 51% yes [25]
9q34 67% 9q31.11 [21, 24]
11q > 35% yes [23]
12p13.1-12p13.2 22% down at 12p13.31-12p13-2 [25]
13   yes [18]
13 46% yes [25]
13q   yes [17]
13q13 64% no [21, 24]
13q34 64% no [21]
15q22-15q23   down at 15q21.1-15q22.31 [22]
16p12-11 70% down at 16p12.1-16p11.2 [21, 24]
16p13.3 49% no [25]
16q23.2 24% no [25]
17q 42% yes [19]
17q12-17q21   yes [24]
17q12 22% no [25]
17q21 59% yes [21]
17q21.32 24% yes [25]
17q25.3 43% no [25]
19p13 70% yes [21, 24]
20   yes [18, 25]
20p 58% yes [19]
20q   yes [17]
20q 65% yes [23]
20q 100% yes [21]
20q 92% yes [19]
20q13.3 56% yes [22]
20q13.3 81% yes [25]
20q11.2-20q13.2   yes [24]
22q11 61% 22q11.21-22q21.1 [21]
22q13.2 24% no [25]
  1. Literature survey of chromosomal regions with evidence for amplifications in colorectal cancers. We checked all regions of frequent chromosomal amplifications for congruence with expression patterns. Congruence between literature CGH data and our expression data was declared on the presumption that allelic gain causes mRNA up-regulation.