Table 4 Genes in common among in vivo tumors and in vitro cell lines.
From: Gene expression profiles of primary colorectal carcinomas, liver metastases, and carcinomatoses
Genebank Acc. | Gene Symbol | Gene Name | Z-cut | Stage | Fold change IS1 | Fold change IS2 | Fold change IS3 |
|---|---|---|---|---|---|---|---|
X78947 | CTGF | connective tissue growth factor | 2,65 | C | Â | 1.11 | 1.59 |
AF067817 | VAV3 | vav 3 oncogene | -2,63 | C | -24.77 | -3.89 | -1.23 |
AL834404 | NETO2 | neuropilin (NRP) and tolloid (TLL)-like 2 | -2,59 | C | 1.82 | 1.21 | -12.01 |
NM_016234 | ACSL5 | acyl-CoA synthetase long-chain family member 5 | -2,52 | C | -4.64 | -1.75 | -3.09 |
NM_139160 | LOC91614 | novel 58.3 KDA protein | -2,46 | C | -2.23 | -1.59 | 2.58 |
M55905 | ME2 | malic enzyme 2, NAD(+)-dependent, mitochondrial | -2,41 | C | 1.21 | -1.80 | -1.66 |
NM_000620 | NOS1 | nitric oxide synthase 1 (neuronal) | 4,15 | L | 2.06 | 2.51 | -1.69 |
NM_013317 | T1A-2 | lung type-I cell membrane-associated glycoprotein | -3,95 | L | -9.86 | -12.64 | -2.37 |
AK097373 | CYP4Z2P | cytochrome P450 4Z2 pseudogene | 3,92 | L | 1.78 | 1.19 | -15.97 |
X98311 | CEACAM7 | carcinoembryonic antigen-related cell adhesion molecule 7 | 3,92 | L | 1.59 | 1.41 | -7.00 |
NM_139284 | LGI4 | leucine-rich repeat LGI family, member 4 | 3,86 | L | 2.12 | 1.55 | -3.53 |
AF227137 | TAS2R13 | taste receptor, type 2, member 13 | 3,81 | L | 1.35 | 1.20 | 5.73 |
K00422 | HP | haptoglobin | 3,70 | L | 1.32 | 1.33 | 1.64 |
NM_001848 | COL6A1 | collagen, type VI, alpha 1 | -3,62 | L | -5.51 | -39.77 | -1.60 |
X04898 | APOA2 | apolipoprotein A-II | 3,57 | L | 7.16 | 5.61 | -1.18 |
BC016147 | NR4A1 | nuclear receptor subfamily 4, group A, member 1 | -3,41 | L | -6.69 | -3.26 | -6.91 |
NM_173650 | DNAJC5G | DnaJ (Hsp40) homolog, subfamily C, member 5 gamma | 3,37 | L | 2.20 | 2.70 | -3.42 |
NM_152576 | MGC24103 | hypothetical protein MGC24103 | -3,36 | L | -9.78 | -14.62 | -1.10 |
AK056254 | KRT4 | keratin 4 | 3,36 | L | 2.17 | 1.34 | -8.59 |
NM_004671 | PIAS2 | protein inhibitor of activated STAT, 2 | 3,29 | L | 1.96 | 1.19 | 2.16 |
AF328788 | AMN | amnionless homolog (mouse) | 3,12 | L | 2.44 | 3.06 | -6.08 |
BC007287 | ZNF213 | zinc finger protein 213 | 3,07 | L | 3.11 | 1.81 | -2.05 |
BC012125 | SLC39A8 | solute carrier family 39 (zinc transporter), member 8 | -3,04 | L | -4.10 | -2.34 | 2.97 |
NM_020249 | ADAMTS9 | a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 9 | -2,98 | L | 1.03 | -1.45 | -2.91 |
M60828 | FGF7 | fibroblast growth factor 7 (keratinocyte growth factor) | -2,95 | L | -7.06 | -8.61 | -15.00 |
M98398 | CD36 | CD36 antigen (collagen type I receptor, thrombospondin receptor) | -3,17 | P | -23.00 | -21.88 | 1.11 |
NM_033201 | BC008967 | hypothetical gene BC008967 | -2,95 | P | -7.38 | -4.64 | -2.15 |
BC001634 | VAMP8 | vesicle-associated membrane protein 8 (endobrevin) | -2,78 | P | -1.78 | -2.89 | 2.65 |
NM_022912 | C2orf23 | chromosome 2 open reading frame 23 | -2,72 | P | -4.00 | -7.64 | 1.80 |
M27110 | PLP1 | proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) | -2,67 | P | -3.05 | -4.03 | 1.94 |
AB038518 | COLEC12 | collectin sub-family member 12 | -2,62 | P | -9.65 | -9.96 | -10.22 |
AB020629 | ABCA8 | ATP-binding cassette, sub-family A (ABC1), member 8 | -2,60 | P | -1.85 | -2.07 | -6.80 |
Y12653 | UBD | ubiquitin D | 2,60 | P | 2.07 | 1.72 | 1.35 |
AK025416 | UGCGL1 | UDP-glucose ceramide glucosyltransferase-like 1 | -2,60 | P | -5.63 | -3.92 | 1.81 |
AK021429 | SH3MD2 | SH3 multiple domains 2 | -2,59 | P | -1.07 | -1.26 | 2.22 |
NM_032727 | INA | internexin neuronal intermediate filament protein, alpha | -2,54 | P | -2.19 | -2.48 | -1.06 |
AK074207 | SLC37A2 | solute carrier family 37 (glycerol-3-phosphate transporter), member 2 | -2,50 | P | -2.68 | -2.25 | 1.38 |
AJ001014 | RAMP1 | receptor (calcitonin) activity modifying protein 1 | -2,46 | P | -6.00 | -4.48 | -44.44 |
AB007895 | FLJ11383 | hypothetical protein FLJ11383 | -2,41 | P | -1.11 | 1.09 | 2.92 |
NM_016397 | TH1L | TH1-like (Drosophila) | 2,40 | P | 2.39 | 2.35 | -1.27 |