Skip to main content

Table 1 The significant tags with higher expression by Significant Analysis for Microarray between the West and the East tumor SAGE libraries. Only the tags that were successfully associated with a specific gene are shown. The tags are sorted in a significance descending order, first the tags highly expressed in the East and then those highly expressed in the West.

From: In Silico analysis of Gastric carcinoma Serial Analysis of Gene Expression libraries reveals different profiles associated with ethnicity

Tags

Gene Symbol

Protein Name

N° of West libraries where present

West tumor average (Tags per 200,000)

N° of East libraries where present

East tumor average (Tags per 200,000)

TGATTGGTGG

PDGFRA

Platelet-derived growth factor receptor, alpha polypeptide

3

1.88

3

115.05

GGCTGGGTTT

HLX1

H2.0-like homeo box 1 (Drosophila)

2

1.04

3

59.13

TCCGTCCGGA

RPL13

Ribosomal protein L13

3

1.36

3

39.56

ATCTGGAGCA

ADH1C

Alcohol dehydrogenase 1C (class I), gamma polypeptide

3

5.99

3

294.91

TGCTCCTACC

FCGBP

Fc fragment of IgG binding protein

4

4.91

3

111.10

TACCCTGGAA

ADH4

Alcohol dehydrogenase 4 (class II), pi polypeptide

3

3.35

3

56.30

AGGTCTGCCA

AKR1C2

Aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)

3

1.53

3

38.50

GCACCACCGG

MAPK13

Mitogen-activated protein kinase 13

0

0

3

10.62

GGAGGGGAGG

MECR

Mitochondrial trans-2-enoyl-CoA reductase

1

0.55

3

15.72

CTTCCTTGCC

KRT17

Keratin 17

7

220.64

0

0

TAATTTGCAT

EMP1

Epithelial membrane protein 1

7

43.26

0

0

TAAGGCTTAA

KLK10

Kallikrein 10

7

20.35

0

0

TGGAAATGAC

COL1A1

Collagen, type I, alpha 1

7

294.99

2

14.36

TGGATGTACA

CCDC12

Coiled-coil domain containing 12

7

21.69

0

0