Table 1 List of gene targets selected for TaqMan® validation in cohort 1
Gene Symbol | Probe ID | P value | Array fold change | Expression in recurrent vs primary | Assay ID |
|---|---|---|---|---|---|
CLDN16 | 163630 | 0.0068 | 9 | Upregulated | Hs00198134_m1 |
S100B | 114188 | 0.0001 | 6.12 | Upregulated | Hs00389217_m1 |
CACNAID | 127127 | 0.00012 | 3.9 | Upregulated | Hs00167753_m1 |
BTC | 112710 | 0.0006 | 2.67 | Upregulated | Hs00156140_m1 |
IL27RA | 145754 | 0.0005 | 1.82 | Upregulated | Hs00175472_m1 |
CHORDC1 | 183675 | 0.0002 | 1.359 | Upregulated | Hs00854389_m1 |
LASS4 | 155606 | 1.78E-05 | 9.02 | Downregulated | Hs00226114_m1 |
STARD10 | 115998 | 4.26E-05 | 6.03 | Downregulated | Hs00246405_m1 |
CSRP2 | 137165 | 0.0003 | 5.7 | Downregulated | Hs00426717_m1 |
RNPC1 | 215065 | 0.0003 | 4.87 | Downregulated | Hs00246405_m1 |
ARFRP1 | 118657 | 0.0003 | 4.85 | Downregulated | Hs00182389_m1 |
ESM1 | 174810 | 0.005 | 4.68 | Downregulated | Hs00199831_m1 |
CASK | 143978 | 0.00035 | 4.42 | Downregulated | Hs00177620_m1 |
WASF1 | 118398 | 0.0001 | 4.32 | Downregulated | Hs00187514_m1 |
PVRL2 | 128369 | 0.0002 | 4.23 | Downregulated | Hs00161054_m1 |
MGAT4B | 186405 | 0.0002 | 4.13 | Downregulated | Hs00365001_m1 |
LGALS3BP | 185853 | 9.49E-05 | 4.12 | Downregulated | Hs00174774_m1 |
PERP | 141176 | 0.0004 | 3.52 | Downregulated | Hs00751717_m1 |
PGM2L1 | 138177 | 0.0005 | 3.04 | Downregulated | Hs00328100_m1 |
IFNGR1 | 190183 | 0.0003 | 2.57 | Downregulated | Hs00166223_m1 |
USF2 | 144617 | 0.0005 | 1.94 | Downregulated | Hs00231528_m1 |