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Table 3 qHTS protocol

From: Identification of small molecule compounds that inhibit the HIF-1 signaling pathway

Step

Parameter

Value

Description

1

Plate cells

5 μL

2500 HRE-bla Cells

2

Incubation time

4-6 hr

Cells adhere and acclimate

3

Library Compound

Control Compound

23 nL

23 nL

38 μM to 0.5 nM titration series

0.1 nM to 2 μM titrations

(NSC 607097)

4

Reagent

1 μL

Buffer +/- agonist

5

Incubation time

17 hrs

Induce HRE reporter gene

6

Reagent

1 μL

β-Lactamase detection mixture

7

Incubation

2.5 hrs

Cells load and cleave dye

8

Assay Readout

Ex = 405/8 nm

Envision

  1. Notes
  2. 1 Black clear bottom 1536-well plates, single tip dispense of 2500 cells/well into all wells
  3. 2 37°C, 5% CO2 incubator
  4. 3 Pintool transfer of library to columns 5-48, and controls to columns 1-4.
  5. 4 Single tip dispense for each reagent, Column 1 and 4-48, agonist-60 μM CoCl2. Column 2, agonist-120 μM CoCl2. Column 3, buffer only.
  6. 5 37°C, 5% CO2 incubator
  7. 6 Single tip dispense of 0.6 μM CCF4-AM, 1 mg/ml Pluronic F127 surfactant, 3.5% PEG 400, 2.6% TR40, 2 mM probenecid, 0.1% DMSO
  8. 8 460/25 nm and 530/20 nm emission filters