Skip to main content

Table 3 Thirty-seven differentially expressed genes between (SS) and (LS) of canine OS based on SAM analysis

From: Gene expression profiling of canine osteosarcoma reveals genes associated with short and long survival times

Gene Clone ID Q-value (%) Fold change Gene description Gene symbol
DG2-21g13 0.00 4.1 WD repeat and SOCS box containing protein 2 WSB2
DG2-23c15 0.00 3.3 cofilin 2 CFL2
DG2-72g4 0.00 2.7 ankyrin repeat domain protein 17 isoform a ANKRD17
DG42-128j23 0.00 2.1 paraoxonase 1 PON1
DG2-112n11 0.00 2.1 Kinesin heavy chain (Ubiquitous kinesin heavy chain) UKHC
DG32-161c11 0.00 2.0 WNK lysine deficient protein kinase 1 WNK1
DG2-63l7 0.00 1.7 nuclear receptor co-repressor 1 NCOR1
DG32-237k11 0.00 1.6 Ribosomal L1 domain containing protein 1(PBK1) RSL1D1
DG11-239n21 0.00 1.6 cell-cycle and apoptosis regulatory protein 1 CCAR1
DG2-28n13 0.00 1.5 28S ribosomal protein S31, mitochondrial precursor MRPS31
DG2-59p21 0.00 1.4 #NA  
DG2-90b10 4.61 2.2 Heat shock protein HSP 90-alpha HSP90
DG2-123a3 4.61 2.0 Microsomal glutathione S-transferase 1 MGST1
DG2-86b3 4.61 1.6 Canis familiaris similar to T06D8.1a  
DG8-102i3 4.61 1.5 #NA  
DG2-100e22 4.61 1.5 COMM domain containing protein 8 COMMD8
DG2-106f2 4.61 1.4 Translocation protein SEC63 homolog SEC63
DG2-130m14 4.61 1.4 Canis familiaris similar to CG1218-PA  
DG2-90c16 6.15 2.6 #NA  
DG43-1a15 6.15 2.4 #NA  
DG14-71c7 6.15 1.8 serine/arginine repetitive matrix 1 SRRM1
DG2-72p3 6.15 1.6 Vacuolar ATP synthase subunit C V-ATPase C
DG32-216j13 6.15 1.6 Flavin reductase (NADPH-dependent diaphorase) (FLR) BVRB
DG2-94j4 6.15 1.5 Canis lupus familiaris high-mobility group box 1 HMGB1
DG2-42j4 6.15 1.4 FRA10AC1 protein isoform FRA10AC1-1)  
DG42-89n19 6.15 1.4 #NA  
DG2-19i16 9.70 7.2 #NA  
DG2-18m22 9.70 4.6 plasma glutamate carboxypeptidase PGCP
DG9-134g22 9.70 1.9 ankyrin repeat domain 11 ANKRD11
DG2-123m9 9.70 1.9 CG12795-PA  
DG14-14i19 9.70 1.7 Stress-70 protein, mitochondrial precursor (HSAP9) (Mortalin) MOT
DG9-212f9 9.70 1.5 CG12795-PA  
DG2-60f11 9.70 1.5 #NA  
DG2-25k5 9.70 1.4 SMC6 protein SMC6
DG14-86l17 9.70 1.4 #NA  
DG2-24i24 9.70 1.4 60 kDa heat shock protein, mitochondrial precursor HSP60
DG11-243e16 9.70 1.4 splicing factor, arginine/serine-rich 2, interacting protein SFRS2IP
  1. All these genes were upregulated in short survivors. Genes were selected at a FDR <10% and of fold change of ≥1.4. (*#NA: non-annotated for Canis familiaris)