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Table 1 The 31 probe sets (29 genes) in Rapamycin Metagene Index listed by probe set identifier.

From: The rapamycin-regulated gene expression signature determines prognosis for breast cancer

Probe set ID Gene symbol Gene title Included in HG-U133 array
202050_s_at ZMYM4 Zinc finger, MYM-type 4 Yes
202623_at C14orf1 E2F-associated phosphoprotein Yes
203985_at ZNF212 Zinc finger protein 212 Yes
204279_at PSMB9 Proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2) Yes
204985_s_at MGC2650 Trafficking protein particle complex 6A Yes
208669_s_at CRI1 CREBBP/EP300 Yes
209101_at CTGF Connective tissue growth factor Yes
209102_s_at HBP1 HMG-box transcription factor 1 Yes
209216_at WDR45 WD repeat domain 45 Yes
210296_s_at PXMP3 Peroxisomal membrane protein 3, 35 kDa (Zellweger syndrome) Yes
211284_s_at GRN Granulin Yes
214177_s_at PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 Yes
215464_s_at TAX1IP3 Tax1 (human T-cell leukemia virus type I)-binding protein 3 Yes
216041_x_at GRN Granulin Yes
217906_at KLHDC2 Kelch domain containing 2 Yes
218550_s_at LRRC20 Leucine-rich repeat containing 20 Yes
219630_at MAP17 PDZK1-interacting protein 1 Yes
221087_s_at APOL3 Apolipoprotein L, 3 Yes
221476_s_at RPL15 Ribosomal protein L15 Yes
46256_at SSB3 SPRY domain-containing SOCS box protein SSB-3 Yes
1555852_at - - No
222574_s_at DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 No
222802_at EDN1 Endothelin 1 No
223042_s_at FUNDC2 FUN14 domain-containing 2 No
223493_at FBXO4 F-box protein 4 No
224564_s_at RTN3 Reticulon 3 No
224785_at MGC29814 Hypothetical protein MGC29814 No
225076_s_at KIAA1404 Zinc finger, NFX1-type containing 1 No
225898_at WDR54 WD repeat domain 54 No
226157_at TFDP2 Transcription factor Dp-2 (EF2 dimerization partner 2) No
227475_at FOXQ1 Forkhead box Q1 No
  1. ID, identifier.