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Table 1 GSEA of human stem cell signatures

From: Gene expression profiling of mouse p53-deficient epidermal carcinoma defines molecular determinants of human cancer malignancy

Gene Set Name (N)1 Number of enriched genes NES FDR q-val
ES EXP1 (315) 128 2.16 <0.0001*
ES EXP2 (32) 9 1.89 <0.0001*
MYC Targets2 (664) 182 1.63 0.0022*
SOX2 Targets (584) 166 1.54 0.0058*
MYC Targets1 (199) 55 1.47 0.013*
NANOG Targets (797) 225 1.38 0.021*
OCT4 Targets (242) 63 1.22 0.068
NOS Targets (152) 32 1.08 0.23
H3K27 BOUND (886) 245 -1.65 0.0026*
PRC2 Targets (508) 126 -1.59 0.0038*
EED Targets (800) 183 -1.55 0.0042*
SUZ12 Targets (819) 201 -1.65 0.005*
NOS TFS (32) 5 -1.08 0.24
  1. 1 N: number of genes from each gene set in mouse chip.
  2. NES: normalized enrichment score.
  3. NES > 0: enrichment in tumors; NES < 0: enrichment in normal skin.
  4. *Significant enrichment.