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Table 2 RT-PCR primers.

From: Epstein-Barr virus-encoded EBNA1 enhances RNA polymerase III-dependent EBER expression through induction of EBER-associated cellular transcription factors

Gene

Primer oligonucleotides (5'-3')

ATF-2

Forward: CACACAACTCCACAGACCCAAA

Reverse: GGAGCCATAACGATCTGTGAAA

c-Myc

Forward: AACCAGAGTTTCATCTGCGACCCG

Reverse: TTGTGCTGATGTGTGGAGACGTGG

5S RNA*

Forward: TTTACGGCCACACCACCCTG

Reverse: AAAGCCTTCAGCACCCTGTA

tRNAtyr*

Forward: CCTTCGATAGCTCAGCTGGTAGAGCGGAGG

Reverse: CGGAATTGAACCAGCGACCTAAGGATGTCC

7SL RNA *

Forward: GTGTCCGCACTAAGTTCGGCATCAATATGG

Reverse: TATTCACAGGCGCGATCCCACTACTGATC

TFIIIC 220*

Forward: TCCAGCGAGACCGTCACACC

Reverse: GGATTGAGTGTTGCTGGGCT

TFIIIC 110*

Forward: CCAGAAGGGGTCTCAAAGTCC

Reverse: CTTTCTTCAGAGATGTCAAAGG

TFIIIC 102*

Forward: GCAGAAGTAACATCATTGGC

Reverse: CCTACTAATGTCCGTTATCTGTGG

TFIIIC 90*

Forward: AAACAGAAGTTGCTGAGTGC

Reverse: ATGGTCAGGCGATTGTCC

TFIIIC 63*

Forward: ATGGCTTGAAGTCCTCCTCCTCC

Reverse: CCGAGATGTTCTACCAGTTATGCG

Bdp1*

Forward: GCTGATAGAGATACTCCTC

Reverse: CCAGAGACAAGAATCTTCTC

Brf1*

Forward: AAATTCTGTGAGCCTCTTCCGTAGTG

Reverse: AGACCCATGCTTGTACATTCCACG

TBP*

Forward: GCCAGAGTTATTTCCTGGTTT

Reverse: CCCAGATAGCAGCACGGTAT

GAPDH

Forward: GCCTCCTGCACCACCAACTG

Reverse: CGACGCCTGCTTCACCACCTTCT

EBER1

Forward: AGGACCTACGCTGCCCTAGA

Reverse: AAAACATGCGGACCACCAGC

EBER2

Forward: GCCGTTGCCCTAGTGGTTT

Reverse: GGGATTAGAGAATCCTGACTT

EBNA1

Forward: CCGCAGATGACCCAGGAGAA

Reverse: TGGAAACCAGGGAGGCAAAT

  1. * Primer sets previously described [29].