Table 1 Summary of genes methylated within the non-invasive LNCaP and DU145 cell lines
From: Epigenetic regulation of CpG promoter methylation in invasive prostate cancer cells
Gene | Agilent ID | Location |
|---|---|---|
ABCF3 | A_17_P02824570 | chr3:185384633-185384688 |
ACRC | A_17_P11784482 | chrX:70712439-70712498 |
ARHGEF9 | A_17_P11762981 | chrX:62889218-62889272 |
AVPR1A | A_17_P08402446 | chr12:61828587-61828646 |
BCL2A1 | A_17_P09781583 | chr15:78049283-78049342 |
BMX | A_17_P11607973 | chrX:15428990-15429037 |
CAPN6 | A_17_P11887436 | chrX:110391469-110391527 |
CNIH3 | A_17_P00830574 | chr1:222866130-222866189 |
DIO3 | A_17_P09520078 | chr14:101092190-101092234 |
DLGAP1 | A_17_P10514555 | chr18:3832861-3832920 |
DONSON | A_17_P11359769 | chr21:33880442-33880501 |
EXOC3L2 | A_17_P17147769 | chr19:50426839-50426891 |
GNB1 | A_17_P00002239 | chr1:1744644-1744703 |
GPR103 | A_17_P03395862 | chr4:122518949-122518996 |
GPR81 | A_17_P08659974 | chr12:121778515-121778572 |
GUCY2F | A_17_P11879791 | chrX:108613896-108613952 |
HRK | A_17_P08637968 | chr12:115801241-115801285 |
hsa-mir-346 | A_17_P07370831 | chr10:88012234-88012278 |
hsa-mir-507 | A_17_P12010468 | chrX:146120196-146120255 |
hsa-mir-542 | A_17_P11969030 | chrX:133503290-133503349 |
HTR2A | A_17_P08830482 | chr13:46365855-46365914 |
IRX3 | A_17_P10024825 | chr16:52875157-52875205 |
LOC339344 | A_17_P10976156 | chr19:51085104-51085163 |
MAGEA8 | A_17_P12020625 | chrX:148768376-148768435 |
MYH3 | A_17_P10227610 | chr17:10497672-10497716 |
NCAM1 | A_17_P08036168 | chr11:112332051-112332110 |
NR2E1 | A_17_P04970834 | chr6:108588654-108588713 |
NUP85 | A_17_P10465401 | chr17:70708211-70708270 |
PARVB | A_17_P11521863 | chr22:42723842-42723888 |
RAMP2 | A_17_P10328303 | chr17:38161563-38161609 |
RBBP8 | A_17_P10568640 | chr18:18762400-18762459 |
RPS4X | A_17_P11786429 | chrX:71410283-71410342 |
SCG3 | A_17_P09654436 | chr15:49755368-49755423 |
SCGB1A1 | A_17_P07831562 | chr11:61937609-61937653 |
SIGLEC1 | A_17_P11026333 | chr20:3615793-3615841 |
SIX1 | A_17_P16707873 | chr14:60183180-60183224 |
SLC5A1 | A_17_P11476138 | chr22:30766279-30766324 |
SOX1 | A_17_P09141969 | chr13:111764575-111764619 |
SPATA5L1 | A_17_P09626282 | chr15:43477779-43477838 |
TCF12 | A_17_P09676944 | chr15:54992977-54993036 |
TMEM46 | A_17_P08732705 | chr13:25520762-25520811 |
TNRC6A | A_17_P09967235 | chr16:24643725-24643784 |
VSIG1 | A_17_P11874787 | chrX:107171900-107171959 |
ZBTB16 | A_17_P08041891 | chr11:113430193-113430252 |