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Table 1 List of genes in the p53-p21 pathway downregulated following Sp1 knockdown

From: Sp1 acetylation is associated with loss of DNA binding at promoters associated with cell cycle arrest and cell death in a colon cell line

Probe Set ID

Gene Title

Gene Symbol

48 hr post Sp1 knockdown

72 hr post Sp1 knockdown

   

Fold change

Regulation

Fold change

Regulation

1556990_at

PERP, TP53 apoptosis effector

PERP

2.87

down

2.46

down

211725_s_at

BH3 interacting domain death agonist

BID

1.78

down

1.85

down

227143_s_at

BH3 interacting domain death agonist

BID

1.64

down

1.70

down

204493_at

BH3 interacting domain death agonist

BID

1.82

down

-

No change

209644_x_at

cyclin-dependent kinase inhibitor 2A (p16)

CDKN2A (p14ARF)

1.53

down

1.51

down

207039_at

cyclin-dependent kinase inhibitor 2A (p16)

CDKN2A (p14ARF)

1.58

down

-

No change

224851_at

cyclin-dependent kinase 6

CDK6

1.40

down

-

No change

209305_s_at

growth arrest and DNA-damage-inducible, beta

GADD45B

1.31

down

-

No change

214710_s_at

cyclin B1

CCNB1

1.30

down

-

No change

204315_s_at

G-2 and S-phase expressed 1

GTSE1 (B99)

1.23

down

-

No change

218424_s_at

STEAP family member 3

STEAP3 (TSAP6)

1.22

down

-

No change

236814_at

Mdm4, transformed 3T3 cell double minute 4, p53 binding protein (mouse)

MDM4

1.73

down

-

No change

225740_x_at

Mdm4, transformed 3T3 cell double minute 4, p53 binding protein (mouse)

MDM4

-

No change

1.74

down

202763_at

caspase 3, apoptosis-related cysteine peptidase

CASP3

-

No change

1.29

down