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Table 2 Association between significant SNPs and 256 CRC patients’ outcome in validation cohort

From: Genetic variations in genes of metabolic enzymes predict postoperational prognosis of patients with colorectal cancer

Gene

SNP

Call rate (%)

Function

OS

RFS

Best Fitting Model

HRa (95 % CI)

P-value

Best Fitting Model

HRa (95 % CI)

P-value

SDHC

rs12064957

98.8

TFBS

Additive

1.16(0.79-1.70)

0.450

Additive

1.14(0.84-1.54)

0.406

 

rs4131826

96.1

TFBS

Additive

0.66(0.46-0.94)

0.022

Additive

0.73(0.55-0.97)

0.027

SDHD

rs544184

97.3

TFBS

Recessive

2.30(1.40-3.78)

0.001

Recessive

2.02(1.33-3.07)

0.001

FH

rs12071124

96.5

TFBS

Additive

0.90(0.67-1.22)

0.511

Additive

0.77(0.60-0.98)

0.033

  1. Abbreviations: CI confidence interval, HR hazard ratio, OS overall survival, RFS recurrence free survival. Significant P values were in bold
  2. aAdjusted by gender, age,tumor position, clinical stage, differentiation and treatment after surgery where appropriate