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Table 2 List of ncRNA-target and the type of interaction present in the network

From: The network of non-coding RNAs and their molecular targets in breast cancer

ncRNADirect targetDirect effect*PMID
BCAR4HK2pos28963395
BCAR4PFKFB3pos28963395
BCAR4PNUTSpos25416949
BCAR4SNIP1pos25416949
EleanorESR1pos25923108
EleanorESR1pos31439835
EleanorFOXO3pos31439835
H19DNMT3Bpos31340867
H19HIF1Apos29106390
H19let-7neg28102845
H19let-7neg29106390
H19LIN28pos28102845
H19MIR675neg30803129
H19PDK1pos29106390
H19SAHHneg31340867
H19BECN1pos31340867
HOTAIRBRD4pos28846832
HOTAIREZH2pos30764859
HOTAIRHBXIPpos26719542
HOTAIRKDM1Apos26719542
HOTAIRNLKneg30764859
LINC00511EZH2pos31395854
LINC00511MIR185neg30482236
LINC00511CDKN1Bneg31395854
LINC00511E2F1pos30482236
LINK-AAKT1pos28218907
LINK-ABRKpos26751287
LINK-ALRRK2pos26751287
LINK-AHIF1Apos26751287
LINK-APIP3pos28218907
MALAT1ID4pos28652379
MALAT1MIR216neg30982780
MALAT1p53pos28652379
MALAT1PNPOpos30982780
MALAT1SRSF1pos28652379
MALAT1TEAD1neg30349115
MALAT1VEGFApos28652379
mir-100BMPR2neg25217527
mir-200bARHGAP18neg28619708
mir-200bZEB1neg25972084
mir-200bZEB2neg25972084
mir-200bSec23aneg25401471
mir-200bZEB2neg25401471
mir-200cOBRneg25840984
mir-200cZEB1neg27402080
mir-200cSec23aneg25401471
mir-200cZEB2neg25401471
mir-200cPDGFRBneg27402080
mir-203aAxlneg26292363
mir-203aONECUT2neg31118200
mir-203aRUNX2neg25634212
mir-203aSLUGneg26292363
mir-203aTP63neg26292363
mir-205Ubc13neg25476932
mir-205ZEB1neg25476932
mir-205ZEB1neg26292362
mir-205ZEB2neg26292362
MIR2052HGEGR1pos30944027
MIR2052HGESR1pos27758888
MIR2052HGPRKCBneg30944027
MIR2052HGAKT1pos27758888
MIR2052HGFOXO3neg27758888
MIR2052HGESR1pos30944027
MIR2052HGLMTK3pos30944027
mir-23bAMOTL1neg26178901
mir-23bPLAUneg26178901
mir-23bSLC6A14neg31269432
mir-25BTG2neg29310680
mir-25NCOA3neg28920955
mir-25AKT1pos29310680
mir-25MAPKpos29310680
mir-25CGASneg28920955
mir-27bENPP1neg26065921
mir-27bPDHXneg30012170
mir-27bABCG2neg26065921
mir-29bCDC42neg25622979
mir-29bHsp47neg25744716
mir-100SMARCA5neg25217527
mir-100SMARCD1neg25217527
mir-100mTORneg28741069
mir-100VEGFAneg28741069
mir-10bBCL2L11neg26359455
mir-10bDYRK1Aneg27569213
mir-10bHOXD10neg25428807
mir-10bHOXD10neg26359455
mir-10bHOXD10neg27569213
mir-10bKLF4neg25428807
mir-10bPTENneg27113763
mir-10bPTENneg27569213
mir-10bTbx5neg27569213
mir-10bAKT1pos27113763
mir-125aHDAC5neg25531695
mir-125aHER2neg30068375
mir-125aHER3neg30068375
mir-125bHER2neg25388283
mir-125bHER2neg30068375
mir-125bHER3neg30068375
mir-146aFN1neg30622118
mir-146aIRAK1neg25712342
mir-146aTRAF6neg25712342
mir-146aNF-KB1neg25712342
mir-181aMMP-14neg25977338
mir-181aTUSC3neg28288641
mir-182Palladinneg27641360
mir-182SMAD7neg27996004
mir-196aHOXB7neg26180042
mir-196aSPRED1neg29685157
mir-196aHER2neg26180042
mir-200aSec23aneg25401471
mir-200aZEB1neg25972084
mir-200aZEB2neg25401471
mir-200aZEB2neg25972084
mir-200bARHGAP18neg28619708
mir-200bZEB1neg25972084
mir-200bZEB2neg25972084
mir-29bPIK3R1neg25622979
mir-29cHsp47neg25744716
mir-29cTET2neg29109788
mir-30aCDH11neg30042152
mir-30aITGA5neg30042152
mir-30aITGB3neg30042152
mir-30aZEB2neg29666469
mir-30eCDH11neg30042152
mir-30eEIF5A2neg29560860
mir-30eITGA5neg30042152
mir-30eITGB3neg30042152
mir-30eSCA1neg29560860
mir-30eTUSC3neg28288641
mir-34aAGO2neg29941603
mir-34aSRCneg26676753
mir-34aC22ORF28neg29187905
mir-34aeEF2Kneg29748184
mir-34aFOXM1neg29748184
mir-34aGFRA3neg28356515
mir-34aMCT-1neg30885232
mir-34aNOTCH1neg25368020
mir-34atRNAiMETneg29941603
mir-9ONECUT2neg31118200
mir-9STARD13neg27402080
mir-9PDGFRBpos27402080
mir-96FOXO1neg27170187
mir-96FOXO1neg29792692
mir-96Palladinneg27641360
NEAT1FOXN3pos28805661
NEAT1GATA3neg28805661
NEAT1JAM1neg25417700
NEAT1MIR204neg30803129
NEAT1SIN3Apos28805661
UCA1MIR122neg29669595
UCA1SLUGpos29774079
  1. *pos positive interaction, activation, neg negative interaction, repression