Table 1 Gene expression assays used for configuring the Taqman low-density array card
From: A molecular signature for the prediction of recurrence in colorectal cancer
Probe sets/Ref. sequences | Gene symbol | Assay IDs | Probe sets/Ref. sequences | Gene symbol | Assay IDs |
|---|---|---|---|---|---|
1554997_a_at | PTGS2 | Hs01573477_g1 | 232278_s_at | DEPDC1 | AJCSVBJ |
1558135_at | TAF11 | Hs01051508_g1 | 232315_at | LOC400713 | AJ89JTA |
1562921_at | GENE3 | AJD1THR | 232684_at | LOC253264 | AJGJPT7 |
200632_s_at | NDRG1 | Hs00608390_m1 | 234768_at | GENE28 | Hs01078763_m1 |
203001_s_at | STMN2 | Hs00975902_m1 | 235229_at | GENE29 | AJMSGPB |
203889_at | SCG5 | Hs02559426_s1 | 238531_x_at | GENE30 | AJ5IPAM |
204886_at | PLK4 | Hs00975273_m1 | 238629_x_at | GENE31 | AJN1EVJ |
204932_at | GENE8 | AJ6RNGU | 241607_at | LOC730102 | AJBJW5B |
204933_s_at | TNFRSF11B | Hs00900360_m1 | 59437_at | C9orf116 | Hs00376168_m1 |
205828_at | MMP3 | Hs00968308_m1 | NM_001025366 | VEGFA | Hs00900055_m1 |
205890_s_at | UBD | Hs00197374_m1 | NM_000610 | CD44 | Hs01075861_m1 |
207808_s_at | PROS1 | Hs00165590_m1 | NM_004530 | MMP2 | Hs01548727_m1 |
211653_x_at | AKR1C2 | AJ70LM2 | NM_003254 | TIMP1 | Hs00171558_m1 |
212315_s_at | NUP210 | Hs01090284_m1 | NM_004994 | MMP9 | Hs00234579_m1 |
215039_at | LOC339524 | AJKAKCV | NM_002046 | GAPDH | Hs02758991_g1 |
219054_at | C5orf23 | AJHSN0F | NM_004360 | CDH1 | Hs01023894_m1 |
219148_at | PBK | Hs00218544_m1 | NM_005429 | VEGFC | Hs00153458_m1 |
220295_x_at | GENE18 | AJFARNZ | NM_003345 | UBC | Hs01871556_s1 |
221703_at | BRIP1 | Hs00908148_m1 | NM_001098210 | CTNNB1 | Hs00355049_m1 |
226211_at | MEG3 | AJLJII3 | NM_015675 | GADD45B | Hs04188837_g1 |
226661_at | CDCA2 | Hs00401022_m1 | NM_002466 | MYBL2 | Hs00942543_m1 |
228877_at | RGL3 | Hs01004328_g1 | NM_000876 | IGF2R | Hs00974474_m1 |
229331_at | SPATA18 | Hs01111872_g1 | NM_000269 | NME1 | Hs02621161_s1 |
230135_at | GENE24 | AID1TYD | Â | Â | Â |