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Table 3 Clinical trials of CRISPR-based cancer therapy

From: Comprehensive review of CRISPR-based gene editing: mechanisms, challenges, and applications in cancer therapy

Cancer Type

Treatment Approach

Patient Population

Description

Advantages

Disadvantages

Ref

Metastatic melanoma

TCR/CAR-T therapy targeting NY-ESO-1

Patients with NY-ESO-1 + tumors who failed prior therapy

T cells were edited to express NY-ESO-1 TCR/CAR, infused back into patients

Target specificity, long-term persistence

Possible off-target effects, limited efficacy in some patients

[160]

Non-Hodgkin's Lymphoma

CD19-targeting CAR-T therapy

Patients with refractory/relapsed NHL

T cells were edited to express CD19 CAR, infused back into patients

High response rate, durable response in some patients

Cytokine release syndrome, neurotoxicity, potential for tumor antigen escape

[161]

Bladder Cancer

PD-1 knockout via CRISPR/Cas9

Patients with high-risk non-muscle-invasive bladder cancer

CRISPR-edited autologous T cells were infused into patients

Potential for enhanced anti-tumor immune response

Off-target effects, potential for immune-related adverse events

[162]

Sarcoma

Targeted genome editing of PAX3-FOXO1 fusion gene

Patients with metastatic sarcoma expressing PAX3-FOXO1

CRISPR/Cas9 was used to target the fusion gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[163]

Solid Tumors

Adoptive transfer of TCR/CAR-T cells targeting neoantigens

Patients with advanced solid tumors

T cells were edited to express TCR/CAR targeting neoantigens unique to each patient's tumor, infused back into patients

Target specificity, potential for durable response

Heterogeneity of tumor neoantigens, potential for off-target effects

[164]

Renal Cell Carcinoma

PD-1 knockout via CRISPR/Cas9

Patients with advanced RCC who failed prior therapies

CRISPR-edited autologous T cells were infused into patients

Potential for enhanced anti-tumor immune response

Off-target effects, potential for immune-related adverse events

[165]

Multiple Myeloma

BCMA-targeting CAR-T therapy

Patients with relapsed/refractory multiple myeloma

T cells were edited to express BCMA CAR, infused back into patients

High response rate, durable response in some patients

Cytokine release syndrome, neurotoxicity

[166]

Glioblastoma

EGFRvIII-targeting CAR-T therapy

Patients with recurrent GBM expressing EGFRvIII

T cells were edited to express EGFRvIII CAR, infused back into patients

Target specificity, potential for durable response

Heterogeneity of tumor antigen expression, potential for off-target effects

[167]

Esophageal Cancer

Targeted genome editing of MUC1 gene

Patients with MUC1 + esophageal squamous cell carcinoma

CRISPR/Cas9 was used to target the MUC1 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[168]

Prostate Cancer

Targeted genome editing of androgen receptor gene

Patients with castration-resistant prostate cancer

CRISPR/Cas9 was used to target the androgen receptor gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[169]

Acute Myeloid Leukemia

CD33-targeting CAR-T therapy

Patients with relapsed/refractory AML

T cells were edited to express CD33 CAR, infused back into patients

Target specificity, potential for durable response

Cytokine release syndrome, neurotoxicity

[170]

Head and Neck Cancer

Targeted genome editing of HPV16 E6 gene

Patients with HPV16 + recurrent or metastatic head and neck cancer

CRISPR/Cas9 was used to target the HPV16 E6 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[171]

Lung Cancer

Targeted genome editing of KRAS gene

Patients with advanced KRAS-mutant lung cancer

CRISPR/Cas9 was used to target the KRAS gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[172]

Neuroblastoma

Targeted genome editing of ALK gene

Patients with ALK-mutant neuroblastoma

CRISPR/Cas9 was used to target the ALK gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[173]

Acute Lymphoblastic Leukemia

CD19-targeting CAR-T therapy

Pediatric patients with relapsed/refractory ALL

T cells were edited to express CD19 CAR, infused back into patients

High response rate, durable response in some patients

Cytokine release syndrome, neurotoxicity

[174]

Solid Tumors

Targeted genome editing of CCR4 gene

Patients with advanced solid tumors

CRISPR/Cas9 was used to target the CCR4 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[175]

Melanoma

Targeted genome editing of NRAS gene

Patients with advanced NRAS-mutant melanoma

CRISPR/Cas9 was used to target the NRAS gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[176]

Cholangiocarcinoma

Targeted genome editing of IDH1 gene

Patients with advanced IDH1-mutant cholangiocarcinoma

CRISPR/Cas9 was used to target the IDH1 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[177]

Solid Tumors

Targeted genome editing of TP53 gene

Patients with advanced solid tumors

CRISPR/Cas9 was used to target the TP53 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[178]

Myeloma

CD19-targeting CAR-T therapy

Patients with relapsed/refractory myeloma

T cells were edited to express CD19 CAR, infused back into patients

High response rate, durable response in some patients

Cytokine release syndrome, neurotoxicity

[179]

Solid Tumors

Targeted genome editing of PD-1 gene

Patients with advanced solid tumors

CRISPR/Cas9 was used to target the PD-1 gene in tumor cells, followed by infusion of edited T cells

Enhances anti-tumor immunity by disrupting immune checkpoint pathway

Off-target effects, limited efficacy in some patients

[180]

Solid Tumors

Targeted genome editing of MUC1 gene

Patients with advanced MUC1 + solid tumors

CRISPR/Cas9 was used to target the MUC1 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[181]

Multiple Solid Tumors

Targeted genome editing of EGFR gene

Patients with advanced EGFR-mutant solid tumors

CRISPR/Cas9 was used to target the EGFR gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[165]

Leukemia/Lymphoma

Targeted genome editing of CD22 gene

Patients with relapsed/refractory CD22 + leukemia/lymphoma

CRISPR/Cas9 was used to target the CD22 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[182]

Solid Tumors

Targeted genome editing of PTEN gene

Patients with advanced PTEN-deficient solid tumors

CRISPR/Cas9 was used to target the PTEN gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[183]

Multiple Solid Tumors

Targeted genome editing of PDCD1 gene

Patients with advanced solid tumors

CRISPR/Cas9 was used to target the PDCD1 gene in tumor cells, followed by infusion of edited T cells

Enhances anti-tumor immunity by disrupting immune checkpoint pathway

Off-target effects, limited efficacy in some patients

[184]

Leukemia/Lymphoma

Targeted genome editing of TCR gene

Patients with relapsed/refractory leukemia/lymphoma

CRISPR/Cas9 was used to target the TCR gene in T cells, followed by infusion of edited T cells

Specific targeting of TCR gene for enhanced T-cell activity

Off-target effects, limited efficacy in some patients

[185]

Leukemia/Lymphoma

CD19-targeting CAR-T therapy

Patients with relapsed/refractory leukemia/lymphoma

T cells were edited to express CD19 CAR, infused back into patients

High response rate, durable response in some patients

Cytokine release syndrome, neurotoxicity

[186]

Solid Tumors

Targeted genome editing of HIF-1α gene

Patients with advanced HIF-1α-overexpressing solid tumors

CRISPR/Cas9 was used to target the HIF-1α gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[187]

Non-small cell lung cancer

CRISPR/Cas9-mediated PD-1 knockout

Patients with advanced PD-L1 + non-small cell lung cancer

CRISPR/Cas9 was used to knock out the PD-1 gene in T cells, followed by infusion of edited T cells

Disrupts immune checkpoint pathway

Off-target effects, limited efficacy in some patients

[188]

Multiple Solid Tumors

CRISPR/Cas9-mediated knockout of TGF-β receptor II

Patients with advanced TGF-β-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the TGF-β receptor II gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[189]

Solid Tumors

CRISPR/Cas9-mediated knockout of DNMT1

Patients with advanced solid tumors

CRISPR/Cas9 was used to knock out the DNMT1 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of epigenetic regulator

Off-target effects, limited efficacy in some patients

[190]

Solid Tumors

CRISPR/Cas9-mediated knockout of LAP

Patients with advanced LAP-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the LAP gene in tumor cells, followed by infusion of edited T cells

Specific targeting of immunosuppressive mechanism

Off-target effects, limited efficacy in some patients

[191]

Solid Tumors

CRISPR/Cas9-mediated knockout of AXL

Patients with advanced AXL-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the AXL gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[192]

Solid Tumors

CRISPR/Cas9-mediated knockout of HLA class I

Patients with advanced HLA class I-deficient solid tumors

CRISPR/Cas9 was used to knock out the HLA class I genes in tumor cells, followed by infusion of edited T cells

Specific targeting of immune evasion mechanism

Off-target effects, limited efficacy in some patients

[193]

Leukemia/Lymphoma

CRISPR/Cas9-mediated knockout of TCR and B2M

Patients with relapsed/refractory T-cell malignancies

CRISPR/Cas9 was used to knock out the TCR and B2M genes in T cells, followed by infusion of edited T cells

Disruption of T-cell receptor and MHC class I expression to prevent graft-versus-host disease and enhance anti-tumor activity

Off-target effects, limited efficacy in some patients

[194]

Solid Tumors

CRISPR/Cas9-mediated knockout of β-catenin

Patients with advanced β-catenin-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the β-catenin gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[195]

Leukemia/Lymphoma

CRISPR/Cas9-mediated knockout of CD7

Patients with relapsed/refractory CD7 + leukemia/lymphoma

CRISPR/Cas9 was used to knock out the CD7 gene in T cells, followed by infusion of edited T cells

Specific targeting of B-cell antigen

Off-target effects, limited efficacy in some patients

[196]

Solid Tumors

CRISPR/Cas9-mediated knockout of PSCA

Patients with advanced PSCA-expressing solid tumors

CRISPR/Cas9 was used to knock out the PSCA gene in tumor cells, followed by infusion of edited T cells

Specific targeting of tumor-associated antigen

Off-target effects, limited efficacy in some patients

[190]

Solid Tumors

CRISPR/Cas9-mediated knockout of APOBEC3B

Patients with advanced APOBEC3B-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the APOBEC3B gene in tumor cells, followed by infusion of edited T cells

Specific targeting of mutagenic enzyme

Off-target effects, limited efficacy in some patients

[197]

Solid Tumors

CRISPR/Cas9-mediated knockout of IL2RG

Patients with advanced IL2RG-deficient solid tumors

CRISPR/Cas9 was used to knock out the IL2RG gene in T cells, followed by infusion of edited T cells

Specific targeting of immunodeficiency gene

Off-target effects, limited efficacy in some patients

[198]

Solid Tumors

CRISPR/Cas9-mediated knockout of ARID1A

Patients with advanced ARID1A-mutant solid tumors

CRISPR/Cas9 was used to knock out the ARID1A gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogenic driver mutation

Off-target effects, limited efficacy in some patients

[199]

Solid Tumors

CRISPR/Cas9-mediated knockout of TRAC

Patients with advanced TRAC-deficient solid tumors

CRISPR/Cas9 was used to knock out the TRAC gene in T cells, followed by infusion of edited T cells

Specific targeting of immunodeficiency gene

Off-target effects, limited efficacy in some patients

[200]

Solid Tumors

CRISPR/Cas9-mediated knockout of LAPTM4B

Patients with advanced LAPTM4B-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the LAPTM4B gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogene

Off-target effects, limited efficacy in some patients

[201]

Solid Tumors

CRISPR/Cas9-mediated knockout of HPRT1

Patients with advanced HPRT1-overexpressing solid tumors

CRISPR/Cas9 was used to knock out the HPRT1 gene in tumor cells, followed by infusion of edited T cells

Specific targeting of oncogene

Off-target effects, limited efficacy in some patients

[202]