Table 2 Genes changed basally with RIP140 siRNA
Gene symbol | Gene description | Fold change RIP140 siRNA/ctrl siRNA | p-value |
|---|---|---|---|
FOLR1 | Folate receptor 1 (adult) | -4.65 | 0.000730 |
RAB3B | RAB3B, member RAS oncogene family | -4.33 | 0.005952 |
SMAD5 | SMAD family member 5 | -3.28 | 0.003862 |
MALAT1 | Metastasis associated lung adenocarcinoma 1 (non-coding RNA) | -3.20 | 0.000468 |
DCX | Doublecortex; lissencephaly, X-linked (doublecortin) | +2.82 | 0.000682 |
B3GAT3 | Beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) | -2.63 | 0.005142 |
C14orf111 | Chromosome 14 open reading frame 111 | -2.62 | 0.003088 |
SMAD5 | SMAD family member 5 | -2.60 | 0.006314 |
CUTL1 | Cut-like 1, CCAAT displacement protein (Drosophila) | -2.52 | 0.001457 |
C18orf54 | Chromosome 18 open reading frame 54 | -2.51 | 0.003054 |
PTBP2 | Polypyrimidine tract binding protein 2 | -2.48 | 0.004811 |
NRIP1 | Nuclear receptor interacting protein 1 | -2.42 | 0.011665 |
RSN | Restin (Reed-Steinberg expressed intermediate filament-associated) | -2.36 | 0.007189 |
UHMK1 | U2AF homology motif (UHM) kinase 1 | -2.34 | 0.009057 |
FNIP1 | Folliculin interacting protein 1 | -2.34 | 0.003628 |
PCBP2 | Poly(rC) binding protein 2 | -2.28 | 0.001479 |
BAT2D1 | BAT2 domain containing 1 | -2.28 | 0.001042 |
FAM80B | Family with sequence similarity 80, member B | -2.26 | 0.008836 |
UHMK1 | U2AF homology motif (UHM) kinase 1 | -2.26 | 0.002063 |
XKR6 | XK, Kell blood group complex subunit-related family, member 6 | -2.23 | 0.001595 |
BACH1 | BTB and CNC homology 1, basic leucine zip transcription factor 1 | -2.22 | 0.006338 |
LOC158863 | Hypothetical protein LOC158863 | -2.22 | 0.001177 |
GPD2 | Glycerol-3-phosphate dehydrogenase 2 (mitochondrial) | -2.22 | 0.004723 |
LOC552889 | Hypothetical LOC552889 | -2.18 | 0.014483 |
RBAK | RB-associated KRAB zinc finger | -2.17 | 0.001749 |
ZFR | Zinc finger RNA binding protein | -2.14 | 0.001579 |
SLC39A14 | Solute carrier family 39 (zinc transporter), member 14 | -2.14 | 0.000483 |
UHMK1 | U2AF homology motif (UHM) kinase 1 | -2.12 | 0.000315 |
HNRPU | Heterogen nuclear ribonucleoprotein U (scaffold attach factor A) | -2.12 | 0.000802 |
PGGT1B | Protein geranylgeranyltransferase type I, beta subunit | -2.10 | 0.002873 |
ZNF660 | Zinc finger protein 660 | -2.09 | 0.001916 |
ZNF655 | Zinc finger protein 655 | -2.09 | 0.011026 |
CDC42 | Cell division cycle 42 (GTP binding protein, 25 kDa) | -2.08 | 0.001266 |
ESCO1 | Establishment of cohesion 1 homolog 1 (S. cerevisiae) | -2.08 | 0.002092 |
UBE2W | Ubiquitin-conjugating enzyme E2W (putative) | -2.07 | 0.010394 |
HECTD1 | HECT domain containing 1 | -2.06 | 0.012537 |
UFM1 | Ubiquitin-fold modifier 1 | -2.05 | 0.003571 |
LOC641298 | PI-3-kinase-related kinase SMG-1 – like locus | +2.03 | 0.000555 |
GCNT2 | Glucosaminyl (N-acetyl) transferase 2, (I blood group) | -2.03 | 0.001021 |
EDG7 | Endothelial differentiation, lysophosphatidic acid G-coupled recept | -2.03 | 0.013785 |