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Table 1 List of potential YB-1 partners with their chromosomal location and expression levels in colon cancer

From: NONO and RALY proteins are required for YB-1 oxaliplatin induced resistance in colon adenocarcinoma cell lines

   

CGH databases (163 colon cancer cases)

ONCOMINE databases

Oxaliplatin

Protein name

Accession number

Chromosome

cases

amplification

deletion

comments

resistance

C1QBP

Q07021

17p13.3

44

8

36

down with grade and recurrence

-

FBRL

P22087

19q13.2

26

25

1

up in tumor vs normal

-

RPS7

P62081

2p25.3

28

26

2

up in tumor vs normal

up

CHCHD9

Q5T1J5

9q21.31

22

19

3

up in tumor vs normal

-

HNRPK

P61978

9q21.32

22

19

3

up in tumor vs normal

-

MRPL19

P49406

2p12

22

22

0

up with grade

-

PABPC1

P11940

8q22.3

62

61

1

up in tumor vs normal

up

MRPL9

Q9BYD2

1q21.3

24

23

1

up in tumor vs normal

-

MRPS7

Q9Y2R9

19p13.12

30

25

5

up with genetic instability

-

PTCD3

Q96EY7

2p11.2

25

25

0

up in tumor vs normal

-

SYNCRIP

O60506

6q14.3

31

26

5

up in tumor vs normal

-

MRPL43

A8K4V4

10q24.31

19

14

5

up with genetic instability

-

SERPINH1

A8K259

11q13.5

28

26

2

up in tumor vs normal

-

RPS4X

P62701

Xq13.1

46

41

5

up in tumor vs normal

up

MRPL44

Q9H9J2

2q36.1

25

23

2

up with genetic instability

-

ILF2

Q12905

1q21.3

24

23

1

up in tumor vs normal

-

NONO

A8K525

Xq13.1

46

41

5

up in tumor vs normal

-

HNRNPL

A6ND69

19q13.2

24

23

1

up with genetic instability

up

LOC138046

O60812

8q21.2

59

58

1

up in tumor vs normal

-

MRPS27

Q92552

5q13.2

23

9

14

up with genetic instability

-

RALY

A8K4T9

20q11.22

92

92

0

up in tumor vs normal

up

MRPL23

A6NGQ5

11p15.5

27

26

1

up in tumor vs normal

-

MBL2

P11226

10q21.1

16

14

2

up in metastasis vs colon primary tumor

-

MRPS14

O60783

1q25.1

25

24

1

up in tumor vs normal

-