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Table 2 miR-10a targets in pathways of potential relevance to AML.

From: miR-10a is aberrantly overexpressed in Nucleophosmin1 mutated acute myeloid leukaemia and its suppression induces cell death

Cancer Census Genes

KEGG AML

KEGG apoptosis

KEGG cell cycle

G.O.C. -myeloid related

NPM1mut-AML gene array

n = 366

n = 57

n = 62

n = 124

n = 80

n = 53

ARNT

MLLT6

PIK3CA

BAX

CCNB3

KLF4

CENTD1

BCL6

NF2

RARA

BCL2L11

CDK4

NCOA6

ITM2A

CDK4

NONO

 

CASP9

CDKN2A

PURB

RARA

CREBBP

NR4A3

 

FOXO3

CREBBP

RASGRP4

SPARC

ERBB2

PDE4DIP

 

IRAK4

ORC1L

  

ERCC3

PIK3CA

  

ORC2L

  

FANCD2

PTEN

  

ORDC5L

  

FOXO3

RARA

     

FUS

RECQL4

     

HMGA2

SSX2

     

MLLT10

WRN

     
  1. The genes listed in this table are those in each pathway that are also one of the 1071 permissively identified miR-10a targets. n refers to the number of genes in each pathway interrogated for miR-10a targets. The genes linked to each of the heading in this table are listed in supplemental section. The final column refers to genes that were down regulated in three mRNA gene expression profiling studies of NPM1mut-AML [15–17]. The genes denoted in bold are those that were also stringently identified by all 3 prediction programs. KEGG- Kyoto Encyclopaedia of Genes and Genomes. GOC.- Gene Ontology Consortium