Skip to main content

Table 2 GSEA summary of pathways associated with genes down regulated upon IGFBP2 knockdown

From: Regulation of protumorigenic pathways by Insulin like growth factor binding protein2 and its association along with β-catenin in breast cancer lymph node metastasis

NAME

SIZE

NOM p-val

FDR q-val

FWER p-val

KEGG_CELL_CYCLE

49

0

0

0

KEGG_DNA_REPLICATION

28

0

0

0

KEGG_NUCLEOTIDE_EXCISION_REPAIR

15

0

0

0

KEGG_MISMATCH_REPAIR

15

0

0

0

KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION

15

0

2.19E-04

0.001

KEGG_HOMOLOGOUS_RECOMBINATION

15

0

1.83E-04

0.001

KEGG_PYRIMIDINE_METABOLISM

21

0

1.56E-04

0.001

KEGG_OXIDATIVE_PHOSPHORYLATION

19

0

0.00635

0.039

KEGG_PARKINSONS_DISEASE

21

0

0.01229

0.082

KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION

17

0.006186

0.013514

0.098

KEGG_SPLICEOSOME

32

0.002012

0.01617

0.128

KEGG_OOCYTE_MEIOSIS

30

0

0.02404

0.199

KEGG_P53_SIGNALING_PATHWAY

26

0

0.027815

0.247

KEGG_HUNTINGTONS_DISEASE

30

0.004098

0.032137

0.3

KEGG_WNT_SIGNALING_PATHWAY

21

0.045726

0.138961

0.804

KEGG_PURINE_METABOLISM

26

0.047431

0.150692

0.844

KEGG_GAP_JUNCTION

17

0.15251

0.155502

0.877

KEGG_TGF_BETA_SIGNALING_PATHWAY

15

0.393214

0.318836

0.995

KEGG_SMALL_CELL_LUNG_CANCER

15

0.55144

0.400925

0.999

KEGG_REGULATION_OF_ACTIN_CYTOSKELETON

25

0.517578

0.687552

1

KEGG_TIGHT_JUNCTION

16

0.787018

0.687305

1

KEGG_PATHWAYS_IN_CANCER

52

0.229814

0.731651

1

KEGG_ALZHEIMERS_DISEASE

38

0.433663

0.706543

1

  1. NOM P nominal P value.