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Table 1 Genes highly gained and overexpressed in huT78 cell line.

From: Identification of amplified and highly expressed genes in amplicons of the T-cell line huT78 detected by cDNA microarray CGH

Unigene ID Gene Symbol G E Log2(G) Log2(E) Cytogenetic Location Gene
Hs.76884 ID3 1,857 2,343 0,893 1,228 1p36.13-p36.12 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
Hs.84981 XRCC5 2,04 4,044 1,029 2,016 2q35 X-ray repair complementing defective repair in Chinese hamster cells 5
Hs.162 IGFBP2 2,563 4,544 1,358 2,184 2q33-34 insulin-like growth factor binding protein 2
Hs.82793 PSMB3 1,794 3,874 0,843 1,954 2q35 proteasome subunit, beta type, 3
Hs.174007 VHL 3,119 2,044 1,641 1,031 3p26-p25 von Hippel-Lindau syndrome
Hs.55173 CELSR3 1,862 2,647 0,897 1,404 3p24.1-p21.2 cadherin, EGF LAG seven-pass G-type receptor 3
Hs.180145 HSPC030 1,777 2,947 0,829 1,559 3 HSPC030 protein
Hs.350266 ARGBP2 1,823 2,028 0,866 1,020 4q35.1 Arg/Abl-interacting protein ArgBP2
Hs.179565 MCM3 1,791 4,378 0,841 2,130 6p12 MCM3 minichromosome maintenance deficient 3
Hs.278589 GTF2I 1,886 2,379 0,915 1,251 7q11.23 general transcription factor II, i
Hs.167246 POR 2,007 2,609 1,005 1,384 7q11.2 P450 (cytochrome) oxidoreductase
Hs.61762 HIG2 1,885 3,152 0,915 1,656 7q32.2 hypoxia-inducible protein 2
Hs.274424 SAS 1,743 4,944 0,802 2,306 9p24.1-p23 N-acetylneuraminic acid phosphate synthase; sialic acid synthase
Hs.184793 DKFZP434F195 1,78 2,125 0,832 1,087 9 DKFZP434F195 protein
Hs.18910 POV1 1,78 3,702 0,832 1,888 11p11.2-p11.1 prostate cancer overexpressed gene 1
Hs.91877 THRSP 6,491 3,095 2,698 1,630 11q13.5 thyroid hormone responsive
Hs.180628 DNM1L 1,758 2,715 0,814 1,441 12p12.3 dynamin 1-like
Hs.76294 CD63 1,747 6,165 0,805 2,624 12q12-q13 CD63 antigen (melanoma 1 antigen)
Hs.247888 - 2,284 3,201 1,192 1,679 16  
Hs.12303 SUPT6H 1,742 2,819 0,801 1,495 17q11.2 suppressor of Ty 6 homolog (S. cerevisiae)
Hs.296281 ILF1 1,754 3,146 0,811 1,653 17q25 interleukin enhancer binding factor 1
Hs.75716 SERPINB2 2,358 3,767 1,238 1,913 18q21.3 serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2
Hs.8372 UQCR 2,046 2,916 1,033 1,544 19p13.3 ubiquinol-cytochrome c reductase subunit
Hs.661 NDUFB7 1,845 2,416 0,884 1,272 19p13.12-p13.11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7
Hs.36992 - 4,848 3,213 2,277 1,684 19  
Hs.250615 CYP2A7 1,778 3,718 0,830 1,895 19q13.2 cytochrome P450, subfamily IIA, polypeptide 7
Hs.356727 FKBP1A 1,918 4,022 0,940 2,008 20p13 FK506 binding protein 1A
Hs.305890 BCL2L1 6,941 11,508 2,795 3,525 20q11.21 BCL2-like 1, Bcl-X
Hs.273385 GNAS 1,764 2,059 0,819 1,042 20q13.2-q13.3 GNAS complex locus
Hs.284380 GGT1 1,784 2,762 0,835 1,466 22q11.23 gamma-glutamyltransferase 1
  1. Relation of 30 genes presenting genomic values ≥ 1.7 [log2(G) ≥ 0,8] and expression values ≥ 2 [log2(E) ≥ 1]; it represents gains above 4-fold and overexpression above 2-fold. In bold, genes located in amplicons. G, Genomic values; E, Expression values.
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