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Table 1 RT-PCR and genomic PCR analyses of the 3' UTR of HMGA2

From: Expression levels of HMGA2 in adipocytic tumors correlate with morphologic and cytogenetic subgroups

    RT-PCR products Region Genomic PCR products Region
Case Sample Type of HMGA2 expression 1 2 3 1 2 3
  Amniocytes 1 ND + + + ND ND ND
  Amniocytes 2 ND + + + ND ND ND
  Amniocytes 3 ND + + + ND ND ND
4 Lipoma t(3;12) Differential (+) - (+) + + +
4 Peripheral blood ND ND ND ND + + +
10 Lipoma t(5;12) Aberrant + (+) + + + +
11 Lipoma der(12q13-15) Differential - - - + + +
13 Lipoma der(12q13-15) Aberrant - - - + + +
17 Variant Lipoma Aberrant (+) - (+) + + +
18 Variant Lipoma Aberrant (+) - - + + +
18 Peripheral blood ND ND ND ND + + +
21 Lipoma der(6p21-22) Differential - - (+) ND ND ND
26 Lipoma del(13q) Differential - - - + + +
26 Peripheral blood ND ND ND ND + + +
27 Lipoma del(13q) Aberrant - - - ND ND ND
36 Angiolipoma Aberrant (+) - + ND ND ND
37 Angiolipoma Aberrant - - (+) + + +
38 Angiolipoma Aberrant - - (+) + + +
38 Peripheral blood ND ND ND ND + + +
39 Angiolipoma Weak - - - + + +
39 Peripheral blood ND ND ND ND + + +
40 Angiolipoma Weak - - - + + +
40 Peripheral blood ND ND ND ND + + +
41 Angiolipoma ND - - - + + +
42 Angiolipoma ND - - (+) + + +
43 Angiolipoma ND - - - + + +
49 Hibernoma Aberrant - - (+) + + +
  1. Abbreviations: Aberrant = Log10 value of ≥ 1 for exons 1–2 and exons 4–5; Differential = Aberrant expression of exons 1–2 with ≥ 10 times higher expression than for exons 4–5; Weak = Log10 value 0–1 for exons 1–2 and 4–5; + = strong PCR product; (+) = weak PCR product; - = no PCR product; ND = not determined.