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Table 1 List of downregulated genes in PANC1 cells transfected with cyclin D1 or cyclin D3 siRNA.

From: Differential roles of cyclin D1 and D3 in pancreatic ductal adenocarcinoma

Cyclin D1 down regulated genes

Cyclin D3 down regulated genes

Common Cyclin D1 and D3 down regulated genes

Fold change with D1 siRNA

Gene Symbol

UniGene

Fold change with D3 siRNA

Gene Symbol

UniGene

Fold change with D1 siRNA

Fold change with D3 siRNA

Gene Symbol

UniGene

0.1626

USP24

Hs.477009

0.3528

DHX40

Hs.29403

0.105

0.4495

SLC18A2

Hs.369009

0.2594

UHMK1

Hs.127310

0.3879

FNDC3B

Hs.159430

0.3169

0.4886

TncRNA

Hs.523789

0.2817

PDZD8

Hs.501149

0.3888

GPR180

Hs.439363

0.3967

0.4357

PRDX2

Hs.432121

0.3076

HIPK3

Hs.201918

0.3888

LOC144874

Hs.439363

0.4124

0.4593

LOC400043

Hs.19193

0.336

MALAT1

Hs.642877

0.3939

SLC39A6

Hs.79136

0.4233

0.4004

ELOVL6

Hs.412939

0.3422

GPR137B

Hs.498160

0.405

C1orf52

Hs.26226

0.4569

0.4731

PTBP2

Hs.591430

0.3425

SIKE

Hs.632428

0.4093

LIMS3

Hs.535619

0.4592

0.4352

AHNAK

Hs.502756

0.3558

LIN28B

Hs.23616

0.4093

LOC440895

Hs.535619

0.4615

0.4785

LOC348840

Hs.512227

0.3661

MLLT11

Hs.75823

0.4205

C14orf138

Hs.558541

0.4795

0.484

FAM70A

Hs.437563

0.3673

GALNT7

Hs.127407

0.421

CYP26B1

Hs.91546

0.4798

0.4904

PPP2R1B

Hs.584790

0.3739

PRMT2

Hs.154163

0.4223

GADD45B

Hs.110571

0.4901

0.4935

CA5BL

Hs.532326

0.3742

ARL6IP6

Hs.516468

0.4243

DBF4

Hs.485380

0.5116

0.4906

C9orf5

Hs.621479

0.3933

CNOT6

Hs.157606

0.4287

SYT11

Hs.32984

    

0.3959

ATG12

Hs.264482

0.4288

SLC35F3

Hs.158748

    

0.4142

WDR17

Hs.532056

0.4293

CRLF3

Hs.370168

    

0.4191

PAQR3

Hs.632591

0.4334

PPP2CB

Hs.491440

    

0.4208

PDGFA

Hs.645488

0.4361

RAB27A

Hs.493512

    

0.4296

LRRC58

Hs.518084

0.4433

TMEM140

Hs.567530

    

0.4305

SCML1

Hs.109655

0.446

PDCD4

Hs.232543

    

0.4315

RBM6

Hs.596224

0.4534

HYMAI

Hs.444975

    

0.4405

FAM55C

Hs.130195

0.4534

PLAGL1

Hs.444975

    

0.4416

CPOX

Hs.476982

0.4537

ARMC8

Hs.266826

    

0.4431

PGM2

Hs.23363

0.4558

IFIH1

Hs.163173

    

0.446

PRPF40A

Hs.591637

0.4585

SKP2

Hs.23348

    

0.4463

CMTM4

Hs.643961

0.4601

AFG3L1

Hs.534773

    

0.4467

FBXO27

Hs.187461

0.4607

BEX2

Hs.398989

    

0.4484

HOXB8

Hs.514292

0.4612

ARL6IP5

Hs.518060

    

0.4548

DLD

Hs.131711

0.4614

MBOAT1

Hs.377830

    

0.4554

LOC205251

Hs.128499

0.4685

SLC39A6

Hs.79136

    

0.4578

LGALS8

Hs.4082

0.4731

MAP9

Hs.61271

    

0.4622

E2F7

Hs.416375

0.474

GPRC5B

Hs.148685

    

0.4644

FAM116A

Hs.91085

0.4786

GABARAPL3

Hs.592014

    

0.4668

HRB

Hs.591619

0.4798

C8orf44

Hs.545401

    

0.468

PXK

Hs.190544

0.4798

PTTG3

Hs.545401

    

0.4686

CHPT1

Hs.293077

0.4798

SGK3

Hs.545401

    

0.4712

USP45

Hs.143410

0.486

CDKN1A

Hs.370771

    

0.4718

EIF1AX

Hs.522590

0.4873

SERBP1

Hs.530412

    

0.4746

FDFT1

Hs.593928

0.4902

IQCK

Hs.460217

    

0.4762

C10orf32

Hs.34492

0.4929

DLL1

Hs.379912

    

0.478

ETNK1

Hs.29464

0.4948

KDELC1

Hs.408629

    

0.4823

UBE2Q1

Hs.607928

0.4959

C12orf57

Hs.591045

    

0.4898

FRAT2

Hs.140720

0.4967

IFIT2

Hs.437609

    

0.4918

TMEM97

Hs.199695

0.4969

BCAT1

Hs.438993

    

0.4926

EML4

Hs.593614

0.4973

CUL3

Hs.372286

    

0.4938

ATP11C

Hs.88252

0.4992

ANP32E

Hs.603000

    

0.4979

TMSL8

Hs.56145

0.4998

TIA1

Hs.516075

    

0.4992

PAK3

Hs.390616

       
  1. Dowregulated gene targets in D-cyclin suppressed cells, unique to cyclin D1, cyclin D3, and shared targets of either D1- or D3-cyclin suppression. Genes are listed in order of ascending fold change.