Table 1 Statistics of model building
From: Cancer somatic mutations cluster in a subset of regulatory sites predicted from the ENCODE data
| Â | All transcripts | Cancer set transcripts |
|---|---|---|
Number of models attempted | 17963 transcripts from 9209 genes | 731 transcripts (from 304 genes) |
Number of models built | 16134 (8670 genes) | 654 (292 genes) |
Average r,r 2 | 0.710, 0.519 | 0.718, 0.530 |
Range r 2 | 0.004–0.99 | 0.048–0.925 |
Total candidate elements | 678020 (mean 42/transcript) | 28844 (mean 44/transcript) |
Chosen elements | 25045 (2/transcript) | 1140 (2/transcript) |
Elements chosen for 1 transcript | 20025 | 999 |
Elements chosen for >1 transcript | 5020 | 141 |