Open Access

Erratum to: Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer

  • Sören Müller1, 2, 4,
  • Susanne Raulefs3,
  • Philipp Bruns3,
  • Fabian Afonso-Grunz1, 2,
  • Anne Plötner2,
  • Rolf Thermann6,
  • Carsten Jäger3,
  • Anna Melissa Schlitter9,
  • Bo Kong3,
  • Ivonne Regel3,
  • W Kurt Roth6,
  • Björn Rotter2,
  • Klaus Hoffmeier2,
  • Günter Kahl1,
  • Ina Koch4,
  • Fabian J Theis7, 8,
  • Jörg Kleeff3,
  • Peter Winter2 and
  • Christoph W Michalski5Email author
Contributed equally
Molecular Cancer201514:144

https://doi.org/10.1186/s12943-015-0401-6

Published: 31 July 2015

The original article was published in Molecular Cancer 2015 14:94

Erratum

Due to a publisher error, this article [1] was originally published with an incorrect table 3. The correct table is provided here Table 1.
Table 1

Differentially expressed IncRNAs

IncRNA

NEV normal

NEV PDAC

Log2 FC

FDR

Class

Regulation

PED

other

LINC00671

81.13

0.47

7.45

0.0000000

lincRNA

Down

  

DGCR5

83.72

2.89

4.86

0.0000000

lncRNA

Down

  

LINC00261

278.16

7.04

5.30

0.0000000

lincRNA

Down

 

D [24]

TRHDE-AS1

24.54

1.05

4.54

0.0000015

NAT

Down

  

PITPNA-AS1

94.22

16.50

2.51

0.0000085

NAT

Down

  

SNHG8

820.02

190.34

2.11

0.00001 89

lincRNA

Down

D

 

SNHG9

595.61

149.36

2.00

0.0000217

lincRNA

Down

  

LINC00152

27.79

134.36

-2.27

0.0000230

lincRNA

Up

 

U [24]

CEBPA-AS1

37.03

5.21

2.83

0.0000629

NAT

Down

  

DANCR

357.77

90.05

1.99

0.0000661

lincRNA

Down

  

SCARNA22

56.28

7.07

2.99

0.0001779

ncRNA

Down

  

SCARNA2

27.72

4.21

2.72

0.0002533

ncRNA

Down

  

HNF1A-AS1

72.29

10.99

2.72

0.0002943

NAT

Down

 

U [26]

SDCBP2-AS1

18.87

1.90

3.31

0.0002948

NAT

Down

  

CECR5-AS1

23.83

3.16

2.91

0.0003537

NAT

Down

  

HOTAIRM1

11.60

56.22

-2.28

0.0003752

NAT

Up

U

 

LINC00339

355.98

10.67

5.06

0.0004037

lincRNA

Down

  

TMEM44-AS1

36.53

7.99

2.19

0.0009294

NAT

Down

  

LINC00263

44.69

10.62

2.07

0.0010579

lincRNA

Down

  

MIAT

10.01

46.87

-2.23

0.00119 361

lncRNA

Up

U

 

NAPA-AS1

25.94

4.71

2.46

0.0012669

NAT

Down

  

LINC00340

4.16

28.42

-2.77

0.0013636

lincRNA

Up

  

EPB41L4A-AS1

303.58

97.66

1.64

0.0015839

NAT

Down

  

SERTAD4-AS1

3.19

22.21

-2.80

0.0016944

NAT

Up

  

LHFPL3-AS2

20.61

3.08

2.74

0.0023207

NAT

Down

  

LINC00673

8.59

42.30

-2.30

0.0023447

lincRNA

Up

  

DNAJC27-AS1

20.43

3.65

2.49

0.0030115

NAT

Down

  

PVT1

6.87

43.83

-2.67

0.0056448

lincNRA

Up

U

 

BOLA3-AS1

34.96

9.42

1.89

0.0074620

NAT

Down

  

ZNF503-AS2

21.89

4.65

2.24

0.0079046

NAT

Down

  

ACVR2B-AS1

13.06

1.46

3.16

0.0095731

NAT

Down

  

PRRT3-AS1

28.36

7.04

2.01

0.0095911

NAT

Down

  

LINC00346

1.41

13.14

-3.22

0.0121525

lincRNA

Up

  

LINC00086

11.86

1.76

2.76

0.0132691

lincRNA

Down

  

RUNX1-IT1

2.57

30.23

-3.56

0.0136106

ncRNA

Up

  

THAP7-AS1

29.29

8.11

1.85

0.0198907

NAT

Down

  

ZNF503-AS1

11.56

1.93

2.58

0.0240067

NAT

Down

  

RNF157-AS1

10.82

1.91

2.50

0.0245309

NAT

Down

  

AFAP1-AS1

17.34

153.08

-3.14

0.0265179

NAT

Up

 

U [25]

PSMG3-AS1

24.17

6.92

1.80

0.0291786

NAT

Down

  

LINC00578

2.50

13.79

-2.46

0.0404404

lincRNA

Up

  

H19

2,303.62

721.52

1.67

0.0452843

lincRNA

Down

D

 

GAS5

964.77

471.70

1.03

0.0464071

lncRNA

Down

  

For each differentially expressed lncRNA (FDR < 0.05) the mean normalized expression values (NEV) for each group is provided together with the ratio between normal and PDAC expression in log2 scale (log2 FC). Furthermore, "Class" indicates the lncRNA type, "PED" the expression as provided by the pancreatic cancer expression database (U: Upregulated in PDAC, D: Downregulated in PDAC) and the last column presents information about the expression level of the RNA in other types of cancer

Notes

Authors’ Affiliations

(1)
Molecular BioSciences, Goethe University
(2)
GenXPro GmbH, Frankfurt Biotechnology Innovation Center
(3)
Department of Surgery, Klinikum Rechts der Isar, Technische Universität München
(4)
Molecular Bioinformatics Group, Institute of Computer Science, Cluster of Excellence Frankfurt ‘Macromolecular Complexes’ Faculty of Computer Science and Mathematics
(5)
Department of Surgery, University of Heidelberg
(6)
GFE Blut mbH, Frankfurt Biotechnology Innovation Center
(7)
Institute of Computational Biology, Helmholtz Zentrum Munich
(8)
Department of Mathematics, TU Munich
(9)
Department of Pathology, Klinikum Rechts der Isar, Technische Universität München

Reference

  1. Müller S, Raulefs S, Bruns P, Grunz FA, Plötner A, Thermann R, et al. Kahl G1, Koch I, Theis FJ, Kleeff J, Winte P, Michalsk CW. Next-generation sequencing reveals novel differentially regulated mRNAs, lncRNAs, miRNAs, sdRNAs and a piRNA in pancreatic cancer. Mol Cancer. 2015;14:94.PubMed CentralView ArticlePubMedGoogle Scholar

Copyright

© Müller et al. 2015

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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