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Novel drug targets for personalized precision medicine in relapsed/refractory diffuse large B-cell lymphoma: a comprehensive review
Molecular Cancer volume 14, Article number: 207 (2015)
Diffuse large B-cell lymphoma (DLBCL) is a clinically heterogeneous lymphoid malignancy and the most common subtype of non-Hodgkin’s lymphoma in adults, with one of the highest mortality rates in most developed areas of the world. More than half of DLBLC patients can be cured with standard R-CHOP regimens, however approximately 30 to 40 % of patients will develop relapsed/refractory disease that remains a major cause of morbidity and mortality due to the limited therapeutic options.
Recent advances in gene expression profiling have led to the identification of at least three distinct molecular subtypes of DLBCL: a germinal center B cell-like subtype, an activated B cell-like subtype, and a primary mediastinal B-cell lymphoma subtype. Moreover, recent findings have not only increased our understanding of the molecular basis of chemotherapy resistance but have also helped identify molecular subsets of DLBCL and rational targets for drug interventions that may allow for subtype/subset-specific molecularly targeted precision medicine and personalized combinations to both prevent and treat relapsed/refractory DLBCL. Novel agents such as lenalidomide, ibrutinib, bortezomib, CC-122, epratuzumab or pidilizumab used as single-agent or in combination with (rituximab-based) chemotherapy have already demonstrated promising activity in patients with relapsed/refractory DLBCL. Several novel potential drug targets have been recently identified such as the BET bromodomain protein (BRD)-4, phosphoribosyl-pyrophosphate synthetase (PRPS)-2, macrodomain-containing mono-ADP-ribosyltransferase (ARTD)-9 (also known as PARP9), deltex-3-like E3 ubiquitin ligase (DTX3L) (also known as BBAP), NF-kappaB inducing kinase (NIK) and transforming growth factor beta receptor (TGFβR).
This review highlights the new insights into the molecular basis of relapsed/refractory DLBCL and summarizes the most promising drug targets and experimental treatments for relapsed/refractory DLBCL, including the use of novel agents such as lenalidomide, ibrutinib, bortezomib, pidilizumab, epratuzumab, brentuximab-vedotin or CAR T cells, dual inhibitors, as well as mechanism-based combinatorial experimental therapies. We also provide a comprehensive and updated list of current drugs, drug targets and preclinical and clinical experimental studies in DLBCL. A special focus is given on STAT1, ARTD9, DTX3L and ARTD8 (also known as PARP14) as novel potential drug targets in distinct molecular subsets of DLBCL.
Diffuse large B-cell lymphoma (DLBCL) is a clinically and genetically heterogeneous lymphoid malignancy with molecular subtypes and subsets defined by distinct molecular signatures and clinical outcomes. Many subtypes and subsets are at high-risk for treatment failure with standard immuno-chemotherapy [1–4]. DLBCL is by far the most common category and disease entity of B-cell non-Hodgkin lymphoma (NHL) in adults, with one of the highest mortality rates of B-cell NHL in most developed areas of the world [1–3]. In Europe and USA, the current annual incidence of NHL is estimated to be 15–20 cases/100,000 . DLBCL accounts for approximately 30–40 % of all newly diagnosed B-cell NHL cases in Western countries, and for an even higher percentage in developing countries [6–9]. The median age of DLBCL at diagnosis falls between the sixth and seventh decade [1, 9]. DLBCL corresponds to a group of lymphoid malignancies composed of large cells with vesicular nuclei, prominent nucleoli, basophilic cytoplasm and a high proliferation rate . DLBCL is usually aggressive, characterized by the appearance of rapidly growing tumors in lymph nodes, spleen, liver, bone marrow or other organs . Nearly 90 % of aggressive mature B-cell NHL tumors in the Western world are identified as DLBCL [6, 7]. More than half of DLBLC patients can be cured with current multi-agent chemo-, radio- and/or immunotherapeutic regimes, combined with or without autologous stem cell transplantation, representing one of the successes of modern cancer therapy. However, approximately 30 to 40 % of patients will develop relapsed or refractory disease that remains a major cause of morbidity and mortality in most developed areas of the world [2, 3, 6, 7].
Gene expression and genome sequencing analyses have not only increased our understanding of DLBCL subtypes and the molecular basis of chemotherapy resistance but also led to the identification of novel molecular DLBCL subsets and rational targets for drug interventions that may allow for subtype/subset-specific molecularly targeted precision medicine and personalized combinations to both prevent and treat relapsed/refractory DLBCL. Recent studies identified several novel potential drug targets such as, the BET bromodomain protein 4, phosphoribosyl-pyrophosphate synthetase 2, macrodomain-containing mono-ADP-ribosyltransferase 9, deltex-3-like E3 ubiquitin ligase, NF-kappaB inducing kinase, programmed cell death 1 and transforming growth factor beta receptor.
In the present review we give a systematic overview of the current drug targets and experimental treatments for newly diagnosed and relapsed/refractory DLBCL. We also provide comprehensive and updated lists of current drug targets and preclinical and clinical experimental studies in DLBCL, including mechanism based combinatorial studies. The use of novel approaches for relapsed/refractory DLBCL, such as antibody drug conjugates and chimeric antigen receptor-modified autologous T cells will also be discussed. A special focus is given on STAT1, ARTD9, DTX3L and ARTD8 as novel potential drug targets in distinct molecular subsets of DLBCL, respectively.
Oncogenic pathways in DLBCL
The majority of DLBCLs are thought to arise from normal antigen-exposed B cells that are at separate stages of differentiation and are undergoing clonal expansion in the germinal center (GCs) of peripheral lymphoid organs [1–3]. DLBCLs are considered clonal malignancies that evolve and progress through a range of multistep transformation processes, i.e., chromosomal translocations through errors in the Ig gene remodeling processes during normal B cell differentiation [11–13].
Progression of DLBCLs to a more aggressive state either evolves slowly over time as a consequence of clonal evolution (selective growth and survival benefits of subclones) or alternatively, through the rapid outgrowth after catastrophic intracellular events that result in subclones characterized by extensive DNA rearrangements that have occurred simultaneously and that confer a significant survival advantage [3, 11, 12, 14]. Consistent with their clinical and genetic (clonal) heterogeneity, several diverse genetic abnormalities have been identified in DLBCL including aberrant somatic hypermutations, nonrandom chromosomal deletions, balanced reciprocal translocations deregulating the expression of proto-oncogene products such as BCL6, REL, BCL2 or c-MYC, and often associated with dysregulated apoptosis or defective DNA repair [2, 3, 12, 13, 15–17].
Several recent whole-genome/exome sequencing studies identified over 300 DLBCL cancer genes that are recurrently mutated in primary DLBCLs [12, 13, 15–22]. These recurrent mutations are located both in genes that are well known to be functionally relevant in DLBCL and in genes for which a functional role in DLBCL has not been previously suspected [12, 16, 17, 22]. It is thought that the primary or early oncogenic events are chromosomal translocations involving oncogenes such as BCL6, BCL2, REL or c-MYC whereas the secondary or late oncogenic events consist of clonally represented recurrent mutations/gene alterations including BCL2, PRDM1, CARD11, MyD88, TNFAIP3, CREBBP, TP53, EZH2, MLL2, MYOM2, PIM1, LYN, CD36, B2M, CD79B, MEF2B, ANKLE2, KDM2B, HNF1B, NOTCH1/2, DTX1 and MYCCD58 [12, 13, 15–22]. Moreover, alterations in a variety of DNA repair and DNA damage signaling genes, such as ARTEMIS, DNA-PKS, KU80, KU70, CHECK2 or ARTD1/PARP1 that affect the MMR and/or NHEJ DNA repair pathways have been recently identified in DLBCL tumors and most likely also constitute intermediate cancer driver events in lymphomagenesis [23, 24]. Overexpression of proto-oncogene products through mutation or translocation of BCL6, BCL2, REL, or c-MYC, constitutive activation of canonical and/or non-canonical nuclear factor kappa B (NF-κB) pathways through genetic lesions and mutations in TNFAIP3, CARD11, CD79A/B, MyD88 or TRAF2 and TRAF3 genes, respectively [15–18, 25–27], and/or epigenetic reprogramming, triggered by mutations in genes such as TET1, MLL2, EZH2, MEF2B, EP300 and CREBBP [15–17, 19, 20, 28–30], account for some of the most frequent cancer driver events in DLBCL . The alterations in gene expression of proto-oncogene products and/or tumor suppressors provide tumor cells with gene expression plasticity, escape from apoptosis and enhanced growth through constitutive survival and proliferative signals. See next sections. For a detailed description of oncogenic pathways in DLBCL, the readers are referred to the recent excellent reviews [2, 3, 31–36].
Distinct disease entities and molecular subtypes of DLBCL
Based on the morphological, biological pathological, and/or clinical grounds, DLBCL has been subdivided into four distinct categories and disease entities within the 4th. Edition of the World Health Organization (WHO) Classification of Tumors of Hematopoietic and Lymphoid Tissues (2008) [1, 9, 37, 38]: 1.) DLBCL with a predominant extranodal location, including primary mediastinal (thymic) large B-cell lymphoma (PMLBCL), 2.) Large cell lymphomas of terminally differentiated B-cells, 3.) B-cell neoplasms with features intermediate between DLBCL and other lymphoid tumors, including B-cell neoplasm with features intermediate between DLBCL and Burkitt lymphoma (DLBCL/BL) and 4.) The biologically and clinically heterogeneous and therefore collectively termed DLBCL, not otherwise specified (DLBCL-NOS) [37, 39–41].
Gene-expression profiling (GEP) and cell-of-origin (COO) studies (cell-of-origin signatures) have confirmed the physiological heterogeneity of the disease and defined at least three molecular subtypes of DLBCL: Primary mediastinal (thymic) large B-cell lymphoma (PMLBCL), belonging to the WHO category DLBCL with a predominant extranodal location  and two subtypes, belonging to the WHO category DLBCL-NOS . The DLBCL-NOS category has been subdivided based on the origin and gene expression signature (COO signature) into at least two/(three) molecular, biologically and clinically distinct subtypes: the two fully classified subtypes germinal center B-cell-like (GCB)-DLBCL and activated B-cell-like (ABC)-DLBCL, the not yet fully classified T cell/histiocyte-rich large B-cell lymphoma (T/HRLBCL) and cases, that remain non-classified, termed type-3 or NC-DLBLCL [35, 39, 40, 42–44]. These DLBCL-NOS subtypes originate from B cells at different stages of development and have distinctive mechanisms of oncogenic activation and different clinical outcomes (Fig. 1) [2, 3, 9, 35, 39, 40, 42, 43]. A summary of clinical, pathological, and molecular characteristics of the molecular subtypes of DLBCL is shown in Table 1. GCB and ABC subgroups represent up to 45 % and 35 %, respectively, of DLBCL-NOS cases [1, 35]. The not yet fully classified T/HRLBCLs account for roughly 1–5 % of all DLBCL cases [1, 45–47] whereas the residual 15–20 % of DLBCL are unclassifiable DLBCLs, including type-3-DLBCL [1, 35].
Primary mediastinal (thymic) large B-cell lymphoma (PMLBCL)
PMLBCL constitutes roughly 2–4 % of B-cell NHL and 8 % of DLBCLs, respectively [1, 48]. It shares morphologic features with DLBCL and some features of classical Hodgkin’s lymphoma (cHL) [1, 9, 35, 48–50]. PMLBCL is characterized by a diffuse proliferation of medium-to-large B cells associated with sclerosis . The presence of somatic hypermutations suggests a germinal or post-germinal center origin for PMLBCL [1, 48, 49, 52]. The similar pattern of mutations of IGVH and BCL6 genes found in thymic B cells and PMLBCLs further supports the theory that PMLBCL originates from thymic B cells . Thus, PMLBCLs is a distinct entity and thought to stem from thymic asteroid medulla B cells of the thymus . PMLBCL normally affects young women with the mediastinum being the predominant site of lymphoma manifestation . PMLBCLs have a gene expression signature that is distinct from other forms of DLBCL but closely resemble that of cHL [53–55]. Over 30 % of all PMLBCL signature genes were also more highly expressed in cHL [53–55]. This is characterized by constitutive activation of the NF-κB signaling pathway [53–55], which in part, acts through c-REL containing NF-κB transcriptional complexes . The SOCS1 gene, a suppressor of Janus kinase (JAK)-2 signaling is recurrently deleted in PMLBCL [57, 58].
The expression of interleukin (IL)-13-receptor and downstream effectors JAK2 and signal transducer and activator of transcription (STAT)-1 as well as their activities are both up-regulated in PMLBCL [53–55]. Proliferation and survival of PMLBCL cells relies on JAK/STAT and NF-κB signaling [59, 60]. Like cHL, PMLBCLs show low levels of expression of multiple components of the B cell (antigen) receptor (BCR)-signaling cascade [53–55]. Moreover, constitutive STAT6 activation has been identified as a characteristic feature of PMLBCL compared with other DLBCL subgroups [3, 53–55, 61]. A summary of the characteristic molecular features of PMLBCL is shown in Table 2. For a detailed description of the biology and pathology of PMLBCL as well as diagnosis and treatment options, the readers are referred to the recent excellent reviews [1, 48, 50, 51, 62–64].
Germinal center B cell-like (GCB)-DLBCL-NOS
GCB-DLBCLs are thought to arise from normal germinal center B cells  and show features that are consistent with germinal center B cell derivation [13, 66–70]. GCB-DLBCLs largely express gene products, such as BCL6, HGAL and LMO2 [13, 65–69] that define normal germinal center B cells within the germinal center light zone . Malignant GCB-DLBCL clones continue to undergo somatic hypermutation of their variable immunoglobulin heavy chain gene and have often switched IgH classes that are mediated by AID, an enzyme that is characteristically expressed at high levels in germinal center B cells [72–74]. The GCB-DLBCL subtype is characterized by low level of NF-κB activation and its survival is not dependent on NF-κB [13, 18]. Various oncogenic pathways are deregulated in GCB-DLBCL and contribute to its molecular pathogenesis. Oncogenic (deregulated) intracellular signaling pathways in GCB-DLBCL are summarized in Fig. 2.
Translocations of BCL2 and/or c-MYC genes are commonly observed in GCB-DLBCLs [13, 66, 75]. These translocations lead to constitutive activation of c-MYC and the anti-apoptotic BCL2 protein  and to a malignant transformation by preventing terminal differentiation or blocking apoptosis [2, 3]. 20 % have gain of function mutations of the histone methyltransferase EZH2, which is a master regulator of the GCB phenotype and cooperates, at least partly, with BCL2 and BCL6 to mediate lymphomagenesis in GCB-DLBCL [20, 29, 77–79]. GCB-DLBCL is furthermore characterized by downregulation of the phosphatase and tensin homologue (PTEN) and concomitant upregulation of phosphatidylinositol-3-kinase (PI3K) signaling pathway (Fig. 2) . Upon loss of the PTEN gene or repression of the PTEN promoter through the mir-17-92 microRNA cluster, phosphatidylinositol-3 phosphate accumulates and AKT and mTORC1 are activated, further promoting cell survival, proliferation, and growth [13, 80–83]. GCB-DLBCL is also associated with loss of sphingosine-1-phosphate receptor-2 (S1PR2) - G-protein alpha 13 (Gα13) signaling, which negatively modulates GC B-cell migration and PI3K signaling [15–17, 84].
The GCB-DLBCL subtype also frequently carries additional mutations affecting epigenetic modification such as mutations in genes encoding the histone acetyltransferases CREB-binding protein (CREBBP) and E1A-binding protein p300 (EP300) as well as the histone-lysine N-methyltransferase and myeloid/lymphoid or mixed-lineage leukemia protein 2 (MLL2) [15, 19, 20, 29]. Other characteristic features of GCB-DLBCLs are the amplification of MDM2, a negative regulator of the tumor suppressor TP53, as well as deletions of the tumor suppressor gene TP73 . A summary of the characteristic molecular features of GCB-DLBCL is shown in Table 3. The GCB subtype has a cure rate of about 70 to 80 % with currently available therapies [13, 85]. For a more detailed description of the biology and pathology of GCB-DLBCL, the readers are referred to the recent excellent reviews [2, 35, 39, 70, 86].
Activated B cell-like (ABC)-DLBCL-NOS
The second subtype, ABC-DLBCL has experienced the germinal center and is thought to arise from post-germinal center B cells that are arrested during plasmacytic differentiation [13, 65, 70, 87]. ABC-DLBCLs have a COO signature that is reminiscent of the plasmablast stage of B cell development . ABC-DLBCLs largely express genes normally induced during in vitro activation of peripheral blood B cells, including genes that define the end stage memory B cells or plasma cells, such as the transcription factors IRF4 and XBP1 [13, 65, 66, 87]. IRF4 is transiently expressed during normal lymphocyte activation and is essential for the proliferation of B cells in response to signals from the activated B cell (antigen) receptor [88, 89]. Thus, constitutive expression of interferon response factor (IRF)-4 in ABC-DLBCLs contributes to unchecked proliferation of DLBCL tumors [90, 91]. X-box binding protein 1 (XBP1) is the master regulator of immunoglobulin secretion [35, 92]. On the other hand, ABC-DLBCLs acquire genetic alterations that repress BLIMP1 expression and function, thereby blocking the differentiation into end stage plasma cells [92–94]. ABC-DLBCL is characterized by genetic abnormalities that play an important role in its pathogenesis. For instance, the p16INK4A/p14ARF tumor suppressor locus is deleted in approximately 30 % of ABC-DLBCLs and is associated with inferior outcome within this subtype [13, 95]. A summary of characteristic molecular features of ABC-DLBCL is shown in Table 4.
ABC-DLBCLs express genes that are upregulated in B cells with activated BCR signaling [13, 96] see also next sections. BCR-mediated NF-κB-dependent survival signaling plays important roles in certain B-cell malignancies [97–99]. Similar to PMLBCL, a key feature of the more aggressive ABC-DLBCL subtype is the constitutive activation of NF-κB-dependent gene expression and its dependency on the activity of NF-κB family members for proliferation and survival [18, 54, 66, 76, 100]. NF-κB is a family of inducible transcription factors consisting of five members, REL-A (p65), REL-B, c-REL, NF-κB1 (p50 and its precursor p105), and NF-κB2 (p52 and its precursor p100) . Inhibition of this pathway using either a dominant active form of NF-κB inhibitory protein inhibitor of kappa B (IκB)-α or a specific IκB kinase inhibitor is toxic to ABC- but not to GCB-DLBCL cell lines [59, 100]. The NF-κB family members REL-A, REL-B and c-REL have the capacity to regulate transcription of various subsets of genes involved in cell proliferation and resistance to apoptosis . ABC-DLBCLs shows a more restricted, potentially developmentally regulated NF-κB target gene signature [54, 76, 100]. Activation of NF-κB has been identified as a key driver in apoptosis resistance in ABC-DLBCL and PMLBCL leading to poor outcomes in patients with ABC-DLBCL [18, 54, 100]. In 39 % of ABC-DLBCL cases, constitutive activation of NF-κB-dependent gene expression is activated by somatic, gain-of-function mutations in the myeloid differentiation primary response gene (88) (MyD88) . The most common MyD88 mutant, L265P, spontaneously coordinates a signaling complex in which interleukin-1 receptor-associated kinase (IRAK)-4 phosphorylates IRAK1, leading to inhibitor of kappa B (IκB) kinase (IKK) and NF-κB activation . In addition, 10 % of ABC-DLBCL patients harbor activating mutations in the gene encoding caspase recruitment domain-containing protein 11 (CARD11) leading to constitutively active NF-κB family members . CARD11 is a key signaling adaptor that coordinates a BCR and CD40-mediated signaling complex that activates NF-κB pathways [105, 106]. ABC-DLBCLs with wild-type CARD11 depend on constitutively active BCR signaling . Both wild-type and mutant CARD11 are essential for chronic active BCR signaling and survival in ABC-DLBCL . Approximately, 20 % of ABC-DLBCLs have mutations in the BCR signaling molecules CD79B and CD79A [66, 96, 104], which lead to constitutively active BCR signaling [66, 96]. Oncogenic (deregulated) intracellular signaling pathways in ABC-DLBCL are summarized in Fig. 3. Translocations of both BCL2 and c-MYC genes also occur in ABC-DLBCLs and contribute to the inferior survival of the ABC subtype of DLBCL . Both GCB-DLBCL and ABC-DLBCL share genetic lesions that lead to inactivation of chromatin modifiers, owing to mutations in CREBBP, EP300 and MLL2 [15, 19, 20, 29], as well as to immune escape, owing to inactivation of β2 microglobulin (B2M), CD58 and genes encoding human leukocyte antigens (HLA-A, HLA-B and HLA-C) [15, 19, 20, 29, 108]. The ABC subtype has a cure rate of about 40 to 50 % with currently available therapies [13, 85]. For a detailed description of the biology and pathology of ABC-DLBCL, the readers are referred to the recent excellent reviews [2, 3, 35, 39, 70, 86, 102, 109, 110].
T cell/histiocyte-rich large B-cell lymphoma (T/HRLBCL)
T cell/histiocyte-rich large B-cell lymphoma (T/HRLBCL) is an aggressive DLBCL with a poor clinical outcome, similar to ABC-DLBCL [45, 47]. T/HRLBCL accounts for approximately 5 % of DLBCL [111, 112]. Many T/HRLBCL tumors, especially cases containing numerous histiocytes behave aggressively and show resistance to current therapies for DLBCL . T/HRLBCL occurs in younger patients, predominantly affects men, and involves liver, spleen, and bone marrow with greater frequency than classical DLBCL [45, 111]. T/HRLBCL is thought to stem from a progenitor cell of germinal center origin . T/HRLBCL is an uncommon morphologic subtype characterized by a minor population of scattered large neoplastic B cells existing in a background of predominant reactive T-lymphocytes with frequent presence of histiocytes [37, 45, 111]. No recurrent genetic rearrangements and/or mutations directly affecting the biology and pathology of T/HRLBCL have been identified yet [111–115]. According to the WHO classification 2008, T/HRLBCL is considered a separate clinically heterogeneous not yet fully classified entity [38, 45–47]. However, several recent morphological and GEP studies [42, 43, 46, 116] indicate that T/HRLBCL and the T/HRLBCL-like variant nodular lymphocyte predominant Hodgkin lymphoma (NLPHL), initially defined as distinct entities, may represent a spectrum of the same disease [42, 43]. T/HRLBCL and NLPHL were found to share rare imbalances on chromosomes 4q and 19p suggesting a similar precursor for both disorders [113, 114]. The different clinical behavior of these lymphomas may be strongly influenced by differences in the lymphoma microenvironment .
The T/HRLBCL associated diffuse T cell- and histiocyte-rich infiltrates are important for a tolerogenic host immune response and for escaping the T cell-mediated immune surveillance [45, 46]. Genes found to be upregulated in T/HRLBCL overlapped significantly with genes found to be related to an unfavorable immune response in a subset of follicular lymphomas and DLBCL [85, 117], particularly with genes found to be related to host inflammatory response in the host response subtype DLBCL, HR-DLBCL (see next sections) . T/HRLBCL and subsets of NLPHL have therefore been suggested to represent together a distinct clinical and molecular subtype of DLBCL-NOS [42, 43]. The gene expression signature of T/HRLBCL is dominated by interferon gamma (IFNγ) and STAT1-dependent pathways and suggests a macrophage/histiocyte-activated status that is required for the tolerogenic host immune response [45, 46, 116, 118]. For a detailed description of the biology and pathology of T/HRLBCL, as well as diagnosis and treatment options, the readers are referred to the recent excellent reviews [45, 47, 111]. In the following sections we will mainly focus on the two molecular subtypes of DLBCL-NOS; GCB- and ABC-DLBCL.
Molecular signatures associated with poor prognosis
More recent GEP studies using multiple clustering methods revealed the existence of at least seven distinct DLBCL-NOS subsets with poor prognosis. The first study identified three discrete DLBCL-NOS subsets defined by their unique transcriptional profiles (consensus cluster (CC) signature): Oxidative phosphorylation (OxPhos)-DLBCL, B-cell receptor (BCR)/proliferation (BCR)-DLBCL, and host-response (HR)-DLBCL . Several other recent studies provided evidence for at least four additional molecular subsets associated with poor prognosis: c-MYC-driven (MD)-DLBCL , stromal-II signature-subtype DLBCL , CDKN2A/2B (9p21)-deletion signature subtype DLBCL  and RCOR1-(TRAF3)-deletion signature subtype DLBCL . An overview of molecular signatures in DLBCL-NOS associated with poor prognosis is presented in Table 5.
The first signature identified by Monti S. et al., termed oxidative phosphorylation (OxPhos) signature, is characterized by overexpression of genes that regulate oxidative phosphorylation, mitochondrial function and the electron transport chain, such as the nicotinamide adenine dinucleotide dehydrogenase (NADH) complex and cytochrome c/cytochrome c oxidase (COX) complex as well as adenosine triphosphate (ATP) synthase components [40, 116, 122]. OxPhos-DLBCL tumors have also higher levels of the antiapoptotic BCL2 related family member, BFL-1/A1 and exhibit genetic lesions affecting the intrinsic and extrinsic apoptotic pathways [40, 116, 122]. The OxPhos-DLBCL subset does not display any chronic or active/functional BCR signaling  and is insensitive to inhibition of BCR survival signaling [122, 123]. OxPhos-DLBCL display enhanced mitochondrial energy transduction, greater incorporation of nutrient-derived carbons into the tricarboxylic acid cycle, and increased glutathione levels . Although the exact nature of survival pathways in this group of tumors is not known, - based on findings in other cancer models- it has been suggested that the increased fatty acid metabolism observed in OxPhos-DLBCL may serve as an alternative survival pathway that is triggered by glucose deprivation or lack of glucose uptake . Indeed, disturbing the fatty acid oxidation program and glutathione synthesis is selectively toxic to the OxPhos-DLBCL tumor subset . 46 % of OxPhos-DLBCL tumors analyzed in theses studies were classified as GCB-, 18 % as ABC- and the remainder 36 % were designated type-3-DLBCL-NOS .
The second subtype signature identified by Monti S. et al., termed BCR/proliferation has increased expression levels of many components of the BCR signaling cascade (CD19, Ig, CD79A, BLK, SYK, PLCγ2, and MAPK4) and enhanced BCR signaling activity [97, 98, 116]. BCR/proliferation-DLBCL tumors also show increased expression levels of cell-cycle regulatory factors, (including CDK2 and MCM family members), DNA damage response signaling factors (such as PMS2 family members, H2AX, PTIP, and TP53) as well as higher levels of various essential B cell-specific transcription factors (such as BCL6, MYC, STAT6, PAX5, OBF1 and E2A). 53.2 % of BCR-DLBCL tumors analyzed in theses studies were classified as ABC-, 23.4 % as GCB- and 23.4 % as type-3-DLBCL-NOS .
In normal untransformed B cells, BCR signaling is activated in an active antigen-dependent manner that initiates the germinal center response [96, 124–128]. Antigen-induced aggregation of the BCR activates BCR signaling through receptor oligomerization and phosphorylation of immunoreceptor tyrosine-based activation motifs (ITAMS) by SRC family kinases, including FYN and B lymphocyte kinase (BLK) [129, 130]. Following ITAM phosphorylation, the spleen tyrosine kinase (SYK) is then recruited to the dually phosphorylated ITAMs through its tandem SRC homology 2 (SH2) domains, resulting in SYK phosphorylation and recruitment of additional adaptor proteins and initiating downstream signaling through phosphatidylinositol-3-kinase (PI3K) , Brutons’s tyrosine kinase (BTK) and finally the activation of protein kinase C (PKC)-β, which in turn phosphorylates many substrates including CARD11 [105, 106]. Active antigen-dependent BCR signaling engages multiple downstream pathways, [105, 106, 129, 130].
Normal untransformed B cells also exhibit tonic, ligand (antigen)-independent, ITAM-transmitted BCR signaling, that promotes subsequent development and survival of mature B cells in the periphery [96, 124–128]. Tonic active BCR signaling engages the phosphoinositide 3-kinase (PI3K) pathway only and is also relevant to B-cell malignancies [96, 124–128, 131]. A role for tonic BCR signaling has been postulated for GCB-DLBCL based on the sensitivity of certain cell lines of this lymphoma subtype to R406, a broad range small molecule inhibitor of SYK . However, genetic knockdown of proximal BCR subunits (IgM, Ig-kappa, CD79A and CD79B) killed only ABC-DLBCL with wild-type CARD11 but did not kill other lymphomas including various GCB-DLBCL cell lines . Moreover, GCB-DLBCL tumors do not acquire highly recurrent mutations in the BCR signaling or canonical NF-κB pathways . Thus it remains to be elucidated whether SYK is indeed essential in GCB-DLBCL or other receptors might be required for activation of the observed BCR-like signaling in GCB-DLBCL .
A third type of BCR signaling, termed chronic active BCR signaling, have been characterized in B-cell malignancies, which can involve mutations of BCR pathway components or be triggered by (auto-) antigens present in the tissue microenvironment [96, 124–128, 131]. Similar to the antigen-activated active BCR signaling in normal B cells chronic active BCR signaling, which typifies ABC-DLBCL, engages multiple downstream pathways, including PI3K/AKT/mTORC1 and canonical NF-κB signaling pathways [31, 96, 105, 106, 110, 124–131]. Chronic active BCR signaling is distinct from tonic BCR signaling, which stimulates the PI3K pathway but not the NF-κB signaling pathways . Up to 20 % of ABC-DLBCLs have somatic gain of function mutations in the immunoreceptor tyrosine-based activation motifs (ITAM) of the BCR subunits CD79B and CD79A, which lead to chronic BCR signaling [66, 96, 104]. However, CD79A/B mutants do not initiate BCR signaling de novo when introduced into heterologous cells, but rather increase the amplitude of ongoing BCR signaling through increased BCR surface expression and attenuation of LYN kinase activity, a negative regulator of BCR signaling [66, 96]. LYN functions as a feedback inhibitor of BCR-stimulated signaling . LYN is frequently mutated and inactivated in ABC-DLBCL . This new pathogenetic mechanism in ABC-DLBCL was therefore termed chronic active BCR signaling . Certain BCR-dependent ABC-DLBCLs also exhibit constitutive PI3K activation, which modulates downstream NF-κB signaling [98, 133].
Several studies have shown that differences in the tumor microenvironment of DLBCL affect survival after treatment with rituximab-based chemotherapeutic regimens [85, 116, 134, 135]. HR-DLBCL was identified by a microenvironment gene expression signature and is associated with increased expression of inflammatory mediators, such as multiple components of the T-cell receptor (TCR), molecules associated with T/NK-cell activation and the complement cascade, downstream targets of IFNγ and/or IFNγ/STAT1 signaling and upregulation of NF-κB pathways [116, 134]. The robust NF-κB target gene signature of HR-DLBCL partially overlaps with that of PMLBCLs, implicating the NF-κB survival pathway in this subtype [40, 54, 116]. HR-DLBCL lack most of the common cytogenetic abnormalities seen in OxPhos-DLBCL or BCR-DLBCL and occur in younger patients who often have splenomegaly and bone marrow involvement . The molecular profiles and clinicopathologic features of HR-DLBCL tumors resemble those of T/HRLBCL [46, 116]. In contrast to OxPhos-DLBCL and BCR-DLBCLs, HR-DLBCL tumors are associated with a brisk, but ineffective host immune/inflammatory response and with a prominent T-cell/dendritic cell infiltrate as previously described for T/HRLBCL [46, 47, 116, 134]. 30.6 % of HR-DLBCL tumors analyzed in theses studies were classified as GCB- and 16.8 % as ABC-DLBCL. However the large majority (53 %) was sub-classified as type-3-DLBCL-NOS . Remarkably, the clinical outcome of HR-DLBCLs upon R-CHOP treatment is not improved despite their increased host immune/inflammatory response [116, 134]. Thus, it has been suggested that similar to T/HRLBCL, either their immune responses are inhibited by counter-regulatory mechanisms or HR-DLBCL tumors were resistant towards R-CHOP-based chemotherapy, or a combination of both [116, 134].
The c-MYC overexpressing subsets of DLBCL-NOS have been recently suggested to be sub-classified as c-MYC-driven (MD) subtype of GCB-, ABC and type-3-DLBCL-NOS . C-MYC is overexpressed in up to 15 % of DLBCL-NOS and in up to 58 % of DLBCL, unclassifiable, with features intermediate between DLBCL and Burkitt lymphoma (DLBCL/BL) as a result of the t(8,14) translocation (5–14 %), gain/amplification (8q24) (21–38 %) or other, epigenetic mechanisms (28–41 %) [136, 137]. In accordance with the concept of c–MYC translocations arising in the GC microenvironment, most of the DLBCL-NOS cases harboring a c-MYC gene translocation show a GCB-type gene expression profile and/or a GCB phenotype [107, 138–147]. Large fractions of DLBCL (58–83 %) with the t(8,14) translocation contain concurrent rearrangements of the anti-apoptotic BCL2 oncogene and are referred to as double-hit lymphomas [107, 137, 144]. Double-hit cases harboring a c-MYC gene translocation and BCL6 rearrangements have also been reported, although at a much lower frequency than with BCL2 . In addition, in some cases with the t(8,14) translocation, there is a concurrent rearrangement of both anti-apoptotic BCL2 and BCL6 oncogene(s), which are referred to as triple-hit lymphomas [107, 144]. A recently published comprehensive study of double-hit and triple-hit lymphomas showed that 62 % of double hit lymphomas involve BCL2 and 18 % involved BCL6, the remaining cases were triple-hit lymphomas .
DLBCLs with high co-expression of c-MYC and BCL2 proteins have an aggressive clinical course and an inferior overall survival when treated with R-CHOP [143, 144, 150]. The aggressive nature of double-hit and triple-hit lymphomas is likely due to the concurrent rearrangement of both the pro-proliferative c-MYC oncogene and the anti-apoptotic BCL2 oncogene [107, 144]. C-MYC/BCL2 co-overexpression in DLBCL is more common in the ABC subtype and contributes to the overall inferior prognosis of patients with ABC-DLBCL [107, 144]. Several studies indicate that the overexpression of the c-MYC protein might be a prognostic marker for poor survival in DLBCL, independent of BCL2 [138–142]. Thus, MD-DLBCLs, composed of the c-MYC-driven subsets of DLBCL-NOS and DLBCL/BL, including subsets of the newly defined categories of double-hit and triple-hit DLBCL have been suggested to represent an independent clinically highly relevant diagnostic molecular subtype . However, it is still controversial whether the high expression of c-MYC has prognostic significance as a sole marker, independent of BCL2 co-overexpression [107, 144–147]. Indeed, it has been recently suggested that only high co-expression of both c-MYC and BCL2 proteins may serve as an independent predictor of very poor survival in DLBCL [107, 144–147]. The significantly worse outcome in patients with double-hit and triple-hit DLBCL may include both synergistic action of c-MYC and BCL2/BCL6 as well as other molecular features originating from the more numerous genetic aberrations in double-hit and triple-hit DLBCL [151, 152]. For instance, TP53 inactivating mutations/deletions have been detected in a large number of high-risk subgroup of relapsed/refractory double-hit DLBCLs with c-MYC and BCL2 [152–154] but not c-MYC and BCL6 gene translocations . TP53 mutations constitute an early recurrent event in lymphomagenesis of c-MYC/BCL2 double-hit DLBCLs, leading to BCL2 driven evasion of apoptosis free from TP53-mediated control and contribute to the highly aggressive morphological and clinical phenotype of this entity [152–157].
Stromal-II signature-subtype DLBCL
A large GEP study performed by Lenz G. et al. identified an additional microenvironment (stromal) gene expression signatures associated with superior or inferior outcomes, respectively after treatment with rituximab-based chemotherapeutic regimens . Three gene-expression signatures, - termed germinal-center B cell, stromal-I and stromal-II signatures - were identified that predicted survival in patients who received CHOP or R-CHOP, respectively . The stromal-I-signature, related to extracellular matrix deposition and histiocytic infiltration was associated with a good outcome [85, 158]. By contrast the angiogenesis-related stromal-II signature reflected tumor blood-vessel density and was found to be highly associated with a poor outcome . This stromal-II signature includes genes encoding key regulators of angiogenesis such as vascular endothelial growth factor (VEGF) receptor 2, growth factor receptor-bound protein (GRB)-10, which mediates VGFR2 signaling; integrin alpha 9, which enhances VEGF signaling and the endothelial receptor tyrosine kinase TEK, the receptor kinase for angiopoietin signaling . DLBCLs with overexpression of the stromal-II gene expression are associated with increased tumor blood-vessel density . The stromal-II gene expression signature has been therefore suggested to represent an angiogenic switch in which the progression of a hyperplastic lesion to a fully malignant tumor is accompanied by new blood-vessel formation .
CDKN2A/2B (9p21) deletion signature-subtype DLBCL
Jardin F. et al. recently defined an additional signature-subtype of DLBCL characterized by deletions of the cyclin-dependent kinase inhibitor genes CDKN2A and/or CDKN2B . DLBCL with CDKN2A/2B (9p21) deletions have a specific gene expression profile and a poor prognosis under R-CHOP treatment . The CDKN2A/2B locus encodes 2 different proteins: p16INK4A and p14ARF. Analysis of the 9p21 genomic region indicated that transcripts encoding p14ARF and p16INK4A were both disrupted in most patients with CDKN2A/2B deletion . CDKN2A/2B deletion impairs both p14ARF/p53 and p16INK4A/pRB pathways. Loss of CDKN2A/2B is observed in up to 35 % of DLBCL-NOS patients and is significantly associated with a poor prognosis after R-CHOP treatment, independently of the international prognostic index (IPI) and COO .
CDKN2A/2B deletion is predominantly observed in ABC-DLBCL [13, 120]. CDKN2A/2B is deleted in up to 30 % of ABC-DLBCL and in up to 4 % of GCB-DLBCL [13, 120]. Patients with CDKN2A/2B deletion predominantly show an activated B cell profile and a specific gene expression signature that combines direct and indirect effects of the deletion, characterized by dysregulation of the RB/E2F pathway, activation of cellular metabolism, increase of anti-apoptotic mechanisms and decreased immune and inflammatory responses, including downregulation of FAS (TNFRSF6), IL1R1, AIM1, ARTD12 (PARP12) and TNFRSF1A .
RCOR1-(TRAF3)-deletion signature-subtype DLBCL
A systematic integrative study of high-resolution genotyping arrays and RNA sequencing data of two independent large cohorts of homogenously R-CHOP-treated DLBCL patients identified novel focal and recurrent deletions in the chromatin regulator and transcriptional corepressor gene RCOR1 (encoding CoREST1) that are associated with a novel prognostically significant risk-associated gene expression signature . RCOR1 deletions define a subgroup of DLBCL patients with unfavorable progression-free survival . The chromatin regulator and transcriptional corepressor RCoR1/CoREST1 has been linked biochemically to hematopoiesis and is part of the BRAF35-histone deacetylase/LSD1-CoREST histone demethylase and chromatin remodeling complex, where it associates with the C-terminal domain of REST, the histone deacetylases 1 and 2 (HDAC1/2), and the histone demethylase LSD1/KDM1A . The established Rcor1 loss-associated prognostic gene signature was independent of the cell of origin classification . This risk-associated gene expression signature comprises 233 genes and is enriched for biological processes that includes upregulation of the proteasome, processing of capped intron-containing pre-mRNA as well as downregulation of signaling events mediated by HDAC class II . Interestingly, loss of RCOR1 was associated with deletions of the TRAF3 gene, which is located in close vicinity. TRAF3 is a negative regulator of the alternative non-canonical NF-κB signaling pathways in DLBCL, acting as a negative regulator of NF-κB-inducing kinase NIK [27, 160, 161]. Thus, it is very likely that the combination of transcriptional pattern changes mediated by RCOR1 loss and the downstream effects on constitutive NF-κB signaling may cooperate and contribute to the malignant phenotype of this subgroup of DLBCL .
Chemotherapeutical strategies and clinical outcome
Until 1997, the standard treatment for DLBCL was the anthracycline-based chemotherapy regimen of cyclophosphamide, hydroxyldaunorubicin, vincristine, and prednisone (CHOP). The majority of DLBCL patients initially respond favorably when treated with CHOP alone, but around 60 % eventually relapse [1, 109, 162]. Relapsed CHOP-resistant lymphomas disseminate and are highly lethal without autologous stem cell transplantation [1, 109, 162]. DLBCL subtypes differently respond to the standard CHOP chemotherapy. The ABC-DLBCL subtype is associated with a very poor prognosis when treated with CHOP only, the majority of ABC-DLBCL patients treated with CHOP alone will succumb to their disease [1, 109, 162]. In contrast, CHOP only treated patients with GCB-DLBCL and PMLBCL have a significantly better outcome with relatively favorable 5-year overall survival rates [1, 109, 162]. The constitutive activation of the NF-κB and BCR pathways has been suggested to be required for the anti-apoptotic phenotype and chemotherapy-resistance in ABC-DLBCL [35, 109, 163].
Since 1997 the co-administration of the chimeric anti-CD20 monoclonal antibody rituximab and CHOP chemotherapy significantly improved the survival of DLBCL patients, with a cure rate of 60 to 70 % [1, 109, 162]. The humanized chimeric anti-CD20 monoclonal antibody rituximab binds to the CD20 antigen on B-lymphoma cells and leads to the inhibition of five main pathways NF-κB, PI3K/AKT/mTORC1, STAT3, MEK/ERK and p38-MAPK pathways, resulting in downregulation of the expression of BCL2 family members and direct activation of FAS-mediated apoptosis [164–173]. This benefit is observed in both ABC- and GCB-DLBCL patients, though GCB-DLBCL is still associated with a much higher overall survival [40, 85, 163] and a relapse rate of only ∼15 % to 20 % [85, 174]. The 3-year progression free survival (PFS) rate and overall survival (OS) rate for R-CHOP treated patients with ABC-DLBCL are approximately 40 % and 45 %, respectively, while the corresponding PFS and OS rate for R-CHOP treated patients with GCB-DLBCL are approximately 74 % and 80 %, respectively [85, 163]. Approximately 15 to 30 % of relapsing GCB- and ABC-DLBCL patients have c-MYC/BCL2 or c-MYC/BCL6 double-hit DLBCLs with high co-expression of c-MYC and BCL2 or BCL6 proteins [85, 174]. These groups of patients pose a particular urgent clinical need because of a very aggressive clinical course, high chemorefractoriness and inferior overall survival when treated with R-CHOP [143, 144, 150].
The combination of rituximab with R-CHOP [175–177] or dose dense CHOP chemotherapy, every 14 or 21 days [178, 179], is now the current standard treatment for most patients with newly diagnosed DLBCL and improves the outcome of DLBCL patients of all ages and risk groups . The complete remission (CR) rate of newly diagnosed DLBCL is approximately 65–75 % with R-CHOP . An alternative standard regimen for first-line treatments is DA-EPOCH-R (dose-adjusted etoposide, prednisone, vincristine, cyclophosphamide, doxorubicin, rituximab) [180, 181]. Preliminary data from ongoing clinical studies suggest that DA-EPOCH-R therapy might have a superior outcome in some subtypes of DLBCL when compared to R-CHOP therapy [180, 182, 183]. For a detailed description of chemotherapeutic regimens used for the first-line treatment of DLBCL, the readers are referred to the recent excellent reviews [1, 109, 184–186]. Unfortunately, specific molecular subsets of DLBCLs at high risk for treatment failure with rituximab and/or anthracycline-based (immuno-)chemotherapy regimes are be coming more frequent . Even though more than half of DLBLC patients achieve and maintain complete remission after first-line therapy with empiric combination multi-agent chemo-, radio- and/or immunotherapeutic regimes; 30 to 40 % of patients with specific molecular subsets of DLBCLs undergo relapse and approximately 10 to 15 % have refractory disease [188, 189]. Relapsed or refractory DLBCL is difficult to treat, with limited therapeutic options. Patients with relapsed/refractory DLBCL have a poor prognosis, with only ~10 % ultimately achieving complete cure .
After finding a significant improvement of survival outcomes in an international randomized phase III trial (PARMA study), high-dose chemotherapy (HDC) followed by autologous stem cell transplantation (ASCT) has been suggested as the standard therapy for patients with relapsed or refractory DLBCL [1, 190]. In addition, a recently performed prospective randomized trial by the Dutch Belgian Hemato-Oncology Cooperative Group established the benefits of rituximab combined with salvage chemotherapy, demonstrating clear survival benefits of combining rituximab with HDC prior to ASCT (HOVON-44 study) . Rituximab-based HDC/ASCT therapy regimens have become the mainstay of therapy for patients with chemotherapy-sensitive relapsed DLBCL, still sensitive to conventional dose salvage chemotherapy [1, 192]. On the other hand, rituximab maintenance appears to have no defined role in relapsed DLBCL after ASCT .
Various salvage regimens are available such as R-DHAP (rituximab, dexamethasone, high-dose cytarabine, and cisplatin) R-DHAP-VIM-DHAP (rituximab-cisplatin, cytarabine, dexamethasone, etoposide - ifosfamide, methotrexate - cisplatin, cytarabine, dexamethasone), R-ESHAP (rituximab, etoposide, steroids, ara-C, and cisplatin), R-DHAX (rituximab, dexamethasone, cytarabine, and oxaliplatin), R-ICE (rituximab, ifosfamide, carboplatin, etoposide), DA-EPOCH-R (etoposide, doxorubicin, and cyclophosphamide with vincristine, prednisone, and rituximab), R-GIFOX (rituximab, gemcitabine, ifosfamide, oxaliplatin), R-GEMOX (rituximab emcitabine, oxaliplatin), R-GDP (rituximab plus gemcitabine, cisplatin, and dexamethasone), R-MINE (rituximab mesna, ifosfamide, mitoxantrone, etoposide) or R-BEAM (rituximab plus carmustine, etoposide, cytarabine, and melphala) [191, 193–206]. However, salvage therapy and transplant conditioning regimens are still suboptimal, as are therapeutic options for patients who relapse following ASCT [1, 192]. Thus, the optimal salvage chemotherapy regimen still needs to be determined. A summary of randomized, phase III trial studies of rituximab combined chemotherapy regimens in relapsed/refractory DLBCL is presented in Table 6. R-ICE or R-DHAP followed by high-dose therapy and autologous stem cell transplantation are the two most widely used regimens worldwide for the treatment of patients with relapsed/refractory DLBCL [1, 192, 193]. Recently, the results of the randomized collaborative trial, which compared R-DHAP to R-ICE followed by HDC/ASCT in relapsed aggressive B-cell lymphoma, including relapsed/refractory DLBCL, have been reported (CORAL study) . There were no significant differences reported between R-ICE and R-DHAP for ORR, 3-year EFS, or OS . However, a subsequent subgroup analysis performed on the CORAL database showed that salvage treatment with R-DHAP was superior to R-ICE in the GCB subtype and may improve outcome in patients with GCB-type DLBCL [174, 207].
Unfortunately, not all patients are fit or eligible for the HDC-ASCT. Patients with aggressive non-GCB-DLBCL (ABC-subtype or c-MYC-driven type-3-DLBCL-NOS) respond poorly to treatment with classical R-ICE or R-DHAP based salvage therapy [207–209]. Relapsed DLBCLs resistant to rituximab alone or R-CHOP treatments are refractory to subsequent treatments with the initial chemotherapy regimen and may even exhibit cross-resistance to multiple chemotherapeutic anticancer drugs [169, 210]. Many patients ultimately succumb to these aggressive tumors despite second-line chemotherapy and autologous stem cell transplantation, resulting in disappointing 3-year overall survival rates of approximately 30 % [4, 188, 207]. Patients with relapsed/refractory DLBCL who relapse after HDC-ASCT and develop refractory disease have an extremely poor prognosis with only a few, if any, curative therapy options and a median survival of approximately 3 to 4 months [188, 207]. The management of patients ineligible for HDC-ASCT or with relapsed/refractory DLBCL relapsing after HDC-ASCT is very difficult and the only remaining treatment option for these patients includes participation in phase 1/2 clinical trials with novel experimental agents or palliative therapy [188, 207]. Thus, for the remainder of these patients with relapsed/refractory and high-risk biological subtypes of DLBCL, further improvements in therapy and novel therapeutic strategies are urgently needed. For a detailed description of drug resistance pathways in DLBCL and chemotherapeutic regimens used for the treatment of relapsed/refractory DLBCL, the readers are referred to the recent excellent reviews [187–189, 192, 211, 212].
Selected novel drug targets under study for relapsed/chemo-refractory DLBCLS
Most patients with relapsed or refractory DLBCLs resistant to rituximab and/or R-CHOP chemotherapy are thought to have ABC-DLBCL or type 3-DLBCLs . Three different types of drug resistance have been defined and are associated with adverse clinical outcomes: Drug resistance of DLBCLs can be inherent from the beginning (innate, due to the genetic heterogeneity of DLBCL tumor cells) [213, 214]. This type is called intrinsic genetic resistance, which is associated with recurrent translocations and the presence of specific genetic abnormalities [12, 18, 213, 214]. Inherited genetic variations can contribute to the risk of therapy-induced side effects [12, 18, 215]. A second type, termed treatment acquired resistance, develops from prior exposure to chemotherapy [33, 213, 214]. Acquisition of chemotherapy resistance in DLBCL is due to the genetic and epigenetic instability of DLBCL tumor cells and emergence of subclonal populations of drug-resistant tumor clones, which eventually leads to the failure of standard rituximab and/or anthracycline-based chemotherapy regimens [33, 213, 214]. A third resistance mechanism, known as tumor microenvironment (TME)/cell adhesion–mediated drug resistance, arises from the interaction of DLBCL tumor cells with the normal stromal tissue [216–219].
Due to the extensive heterogeneous genetic nature of DLBCL, multiple drug-resistant molecular mechanisms are required for the intrinsic genetic resistance and acquisition of chemotherapy resistance in DLBCL. Only a small number of high-risk subsets of DLBCL are associated with increased expression of multidrug pumps (i.e., P-glycoprotein; MDR1/ABCB1) [189, 220, 221] and overexpression does not appear to be consistently associated with chemoresistance in DLBCL [221, 222]. Moreover, CD20 mutations involving the rituximab epitope are rare in both de novo and relapsed/refractory DLBCL tumors, and do not represent a significant cause of R-CHOP resistance . CD20 protein-negative relapses can occur in up to 20 % DLBCL cases after rituximab-containing combination chemotherapies [223–226]. Downregulation of CD20 protein expression strongly correlates with rituximab resistance in vitro . However its clinical relevance is not yet fully understood [223–226]. Chemotherapy resistance has been mainly associated with down-regulation of intrinsic apoptosis pathways and activation of survival pathways in DLBCL [165, 166, 169–171, 189, 228]. For instance, repeated exposure to rituximab can generate a therapy-resistant phenotype by the upregulation of the anti-apoptotic BCL2 family proteins  or downregulation of the pro-apoptotic BAK and BAX proteins . A summary of observed and postulated (immuno)-chemotherapy resistance mechanisms in DLBCL is presented in Table 7.
Multiple driver mutations and aberrant signaling pathways suggested to be required for drug resistance in DLBCL have been recently identified in specific molecular subsets of DLBCLs through gene expression profiling (GEP), transcriptome sequencing, RNA interference screens, and DNA sequencing and have increased our understanding of (chemotherapy-) resistance. A detailed list of novel potential drug targets and agents in DLBCL-NOS, including relapsed/refractory DLBCL is shown in Additional file 1: Table S1. Numerous small molecule inhibitors acting as GCB- and ABC-DLBCL subtype-specific pathway inhibitors are now in various stages of investigation, including clinical trial phase III studies. Only a few of them have been already approved for the treatment of B-cell malignancies, none of them for the treatment of DLBCL (Table 8). At least seven are currently evaluated in clinical phase III studies in patients with newly diagnosed or relapsed/refractory DLBCL (Table 9). These drugs are mainly targeting oncogenic factors regulating cell metabolism, proliferation, cell cycle, growth, migration, survival and angiogenesis in a subtype-specific manner. A detailed list of novel single experimental agents in clinical trials in relapsed/refractory DLBCL-NOS is shown in Additional file 1: Table S2. Completed and ongoing experimental clinical studies combining novel experimental agents with conventional (immuno-)chemotherapy (i.e., R-CHOP, DHAP) in first-line treatment of newly diagnosed DLBCL and/or second-line treatment of relapsed/refractory DLBCL are summarized in Additional file 1: Tables S3–S5.
Most of these drugs are targeting the DLBCL subtypes according to their COO status (GCB- or ABC-specific) and CC status (OxPhos-, BCR- or MD-specific). The most important of these novel drug targets currently under study are discussed below.
Inhibition of BTK and SYK kinases in the BCR-subtype of ABC-DLBCL
As mentioned above chronic active BCR-mediated signaling was recently identified as a critically important pathway in the pathogenesis of ABC-DLBCL [96, 116, 122, 230]. Chronic active BCR signaling in DLBCL is mainly dependent on the BTK, SYK and PI3K kinases . The BTK, SYK and PI3K kinases have significant activities in patients with relapsed/refractory ABC-DLBCL [96, 116, 230]. Thus, the BCR-associated kinases SYK and BTK have emerged as promising therapeutic targets for relapsed/refractory ABC-DLBCL. SiRNA-mediated depletion of SYK or BTK as well as inhibition of SYK or BTK by small molecule inhibitors selectively decreased BCR signaling and induced apoptosis of BCR-dependent DLBCL cell lines [90, 98, 232–234]. In a phase I/II clinical trial study that involved 80 subjects with relapsed or refractory DLBCL, ibrutinib (PCI-32765), a BTK inhibitor, have shown a promising activity of ibrutinib as a single agent in the BCR- subtype of ABC-DLBCL; a 37 % ORR and a 16 % CR in relapsed/refractory DLBCL was reported for patients with the ABC- subtype compared with only 5 % of those with the germinal GCB subtype [235–238]. Thus, ibrutinib efficacy is limited to ABC-DLBCL patients with a constitutively active BCR signaling pathway [235, 239, 240]. Consistent with the cooperation between the BCR and MyD88 pathways observed in vitro, ABC tumors with concomitant BCR and MyD88 mutations responded to ibrutinib frequently . However, the highest number of responses occurred in ABC tumors that lacked BCR mutations, as 67 % of ibrutinib responders had wild-type CD79A and CD79B . Remarkably, ibrutinib does not inhibit the growth and survival of BCR wild-type tumors with MyD88- and/or CARD11 mutations [235, 239, 240] indicating that ibrutinib specifically targets ABC-DLBCL tumors that rely on chronic active BCR signaling .
Ibrutinib is a selective and irreversible BTK inhibitor that binds covalently to a C481 residue in the BTK active site, preventing Y223 phosphorylation required for activation . Ibrutinib is very well tolerable both as single agent and in combination with R-CHOP [235–237, 242]. Ongoing clinical phase II studies and several randomized clinical phase III studies are evaluating ibrutinib with or without R-CHOP in patients with newly diagnosed and relapsed/refractory DLBCL 30 (NCT01325701, NCT01197560, NCT01804686, NCT01855750) [235, 236, 243–245] (Table 9 and Additional file 1: Tables S2–S5). Fostamatinib (R406, FosD), a selective oral small molecule inhibitor of SYK, also showed significant activity in relapsed/refractory DLBCL in a phase I/II study  (Additional file 1: Table S2). More than 20 % of the patients with multiple relapsed/refractory DLBCL responded to therapy with fostamatinib, though the CR was only 5 % . A multicenter phase II trial of fostamatinib has completed and is pending announcement of the results (NCT01499303) (Additional file 1: Table S2). Additional phase II trials have been proposed to determine whether fostamatinib may improve the response to rituximab .
Inhibition of PKCβ in the BCR-subtype of ABC-DLBCL
Another potential therapeutic target in relapsed/refractory BCR-subtypes of ABC-DLBCL is the protein kinase C (PKC) isoform PKCβ II. PKCβ II is a serine/threonine kinase isoform amplified through the BCR signaling pathway and is highly expressed in refractory DLBCL [247–250]. PKCβ-II overexpression is an adverse prognostic factor in DLBCL and associated with poor prognosis in BCR-subtypes of ABC-DLBCL and GCB-DLBCL deficient of phosphatase and tensin homolog (PTEN) [247–251]. Preclinical studies demonstrated that sotrastaurin (AEB071) and enzastaurin, two adenosine triphosphate-competitive selective inhibitors of PKCβ, induce apoptosis and inhibit the proliferation of BCR-subtypes of ABC-DLBCL in vitro and in vivo [252, 253].
Sotrastaurin selectively inhibited the growth of CD79 mutant BCR-subtypes of ABC-DLBCL in vitro and in vivo whereas the presence of CARD11 mutations resulted in resistance to the inhibitor . Sotrastaurin is currently being tested in an international multi-institutional phase I/II trial study in patients with DLBCL that harbor either CD79A or CD79B mutations (NCT01854606) . Treatment with enzastaurin is well tolerated in patients with newly diagnosed DLBCL as well as in patients with relapsed/refractory DLBCL [254–257]. However a recent clinical phase I/II trial study showed that the improved outcome upon treatment using enzastaurin alone was only modest in relapsed/refractory DLBCL (NCT00042666, Additional file 1: Table S2), indicating that enzastaurin is not very effective as single-agent [254–256]. Moreover, a randomized phase III study of enzastaurin as single-agent in patients with newly diagnosed DLBCL did not meet its primary endpoint to improve progression-free survival (NCT00332202)  (Table 9). Two clinical phase II studies evaluating the efficacy and safety of enzastaurin in combination with R-CHOP or R-Gemox have been recently completed and are pending announcement of the results (NCT00436280, NCT00451178) (Additional file 1: Table S3).
Inhibition of canonical NF-κB signaling pathways in ABC-DLBCL
As already discussed in previous sections recent studies validated the NF-κB signaling pathways as an important therapeutic target in ABC-DLBCL. Receptor-mediated constitutive activation of NF-κB in B-cell malignancies can occur through two distinct signaling pathways: the canonical pathway or classical pathway mediated by the action of RelA/p50 heterodimers and the non-canonical or alternative pathway mediated by the action of p52/p50, RelB/p50 or RelB/p52 heterodimers [26, 27, 160, 161]. The canonical pathway is the major NF-κB signaling pathway in DLBCLs and activated through BCR, CD40 and/or TLR signaling and by the inhibitor of κB kinase complex (IKKα/β/γ), which in turn, phosphorylates IκB and causes its degradation [27, 160, 161].
The major fraction of oncogenic NF-κB activating mutations in DLBCL is predominantly related to the canonical NF-κB pathway [12, 16, 18, 19, 96, 104, 259]. The less well-studied non-canonical NF-κB pathway is not yet fully established as a drug target in DLBCL, see next section. ABC-DLBCL and PMLBCL cell lines and primary tumors, including drug-resistant cases, can be sensitized in vitro and in vivo to chemotherapy by treatment with drugs, which can inhibit the canonical NF-κB pathway. For instance, small molecule inhibitors of the IKK complex were found to be selectively toxic for ABC-DLBCL and PMLBCL cell lines, but had no effect on GCB-DLBCL cell lines . Proteasome inhibitors such as bortezomib or carfilzomib, block the degradation of negative regulators of cell cycle progression as well as of NF-κB inhibitory protein IκBα thereby inducing cell cycle arrest and mitochondrial dependent apoptosis in ABC-DLBCL [260–262]. A preclinical/clinical phase II study demonstrated that targeting the canonical NF-κB pathway through inhibition of the 26S proteasome complex with bortezomib can selectively sensitize patients with relapsed/refractory ABC-DLBCL, but not patients with relapsed/refractory GCB-DLBCL, to chemotherapy (including (R-)CHOP and DA-EPOCH) . Bortezomib alone as single agent had no significant activity in relapsed/refractory DLBCL [263–265], but when combined with chemotherapy, it showed a significantly higher response (83 % vs. 13 %) and median overall survival (10.8 vs. 3.4 months) in ABC compared with GCB-DLBCL, respectively  (Additional file 1: Table S5). A subsequent phase I/II study of patients with previously untreated DLBCL investigating bortezomib in combination with R-CHOP demonstrated that the efficacy of bortezomib plus R-CHOP was similar in patients with non-GCB- and GCB-DLBCL, consistent with the concept that the unfavorable non-GCB-DLBCL subgroup with constitutive NF-κB overexpression derives benefit from bortezomib sensitization with chemotherapy  (Additional file 1: Table S3). A phase II study and a randomized phase III study evaluating the use of R-CHOP with or without bortezomib in unselected patients with newly diagnosed DLBCL (Additional file 1: Table S4) as well as a randomized phase II/III study of R-DHAP with and without bortezomib in patients with relapsed/refractory DLBCL are currently ongoing (NCT00931918, NCT01324596 and NCT01805557) (Table 9). Unfortunately, not all ABC-DLBCL are bortezomib-sensitive, and patients may eventually develop bortezomib-resistant disease. Preclinical studies showed that proteasome inhibitors not only trigger the accumulation of proapoptotic proteins, but can also up-regulate antiapoptotic proteins, particularly MCL1  and HSP90 , which are implicated in bortezomib resistance [267–269].
Surprisingly, a recent preclinical study uncovered an unexpected profound regulatory role for the bromodomain and extraterminal domain (BET) proteins BRD2 and BRD4 in cytoplasmic signaling through IKK in ABC-DLBCL . Inhibition BET proteins by small molecules inhibitors CPI203 and JQ1 as well as siRNA-mediated depletion of BRD2 and BRD4 expression, attenuated oncogenic IKKβ signaling, thereby inhibiting downstream oncogenic NF-κB-driven transcriptional programs and killing ABC-DLBCL cells in vitro and in an ABC-DLBCL xenograft model .
Inhibition of MALT1 in the BCR-subtype of ABC-DLBCL
Recent studies demonstrated that the proteolytic activity of mucosa-associated lymphoid tissue lymphoma translocation (MALT) protein-1 is required for the survival and pathogenesis of ABC- DLBCL with chronic active BCR signaling [270, 271] and therefore, represents another new potential therapeutic target in relapsed/refractory cases of the BCR-subtype of ABC-DLBCL . MALT1 is an enzymatically active signaling component essential for upstream activation of NF-κB upon antigen stimulation of BCR . MALT1-dependent cleavage of the non-canonical and tumor suppressive NF-κB family member RELB promotes canonical NF-κB activation in DLBCL . Recent preclinical studies demonstrated that selective inhibition of the proteolytic activity of MALT1 with small-molecule inhibitors blocks the anti-apoptotic NF-κB signaling pathway and elicits toxic effects selectively on MALT1-dependent subsets of ABC-DLBCL cells in vitro and in vivo with very little toxicity towards primary B cells [273, 274].
Inhibition of TLR-mediated canonical NF-κB signaling pathways in ABC-DLBCL
As mentioned above, a recent clinical phase II study demonstrated that ibrutinib does not inhibit the growth and survival of BCR wild-type ABC-DLBCL tumors with MyD88 mutations [235, 239, 240]. MyD88 is an initial adapter linker protein in the canonical NF-κB signaling pathway activated by Toll-like receptors (TLRs), including the endosomal TLRs 7, 8, and 9 . In the presence of the most common MyD88 mutant L265P, ligand activation of those TLRs results in markedly increased signaling with subsequent increased cell activation, cell survival, and cell proliferation in DLBCL . Thus, direct inhibition of TLR/MyD88 signaling pathways by TLR antagonists might circumvent the resistance of BCR wild-type ABC-DLBCL tumors with MyD88 mutations against ibrutinib. A dose escalation phase I/II study evaluating the efficacy and safety of the TLR antagonist IMO-8400 in patients with relapsed or refractory DLBCL bearing a MyD88-L265P mutation has been recently started (NCT02252146). IMO-8400 is an antagonistic oligonucleotide specifically designed to inhibit ligand activation of TLRs 7, 8 and 9 . The scientific rationale for assessing the use of IMO-8400 to treat patients with DLBCL and the L265P mutation is based on the observations that IMO-8400 inhibits ligand-based activation of DLBCL cell lines with the L265P mutation and decreases the survival and proliferation of DLBCL cells (unpublished data of preclinical studies performed by Idera Pharmaceuticals, Inc.).
Inhibition of non-canonical NF-κB signaling pathways in TRAF3-negative ABC-DLBCL
Several recent studies provided strong evidence for an important role of the non-canonical NF-κB signaling pathway in DLBCL, particularly in ABC-DLBCL . Non-canonical NF-κB signaling appears to be activated by a restricted number of ligands in DLBCL, such as CD30 ligand (CD30L), CD40 ligand (CD40L) and B cell activating factor BAFF, belonging to the TNF superfamily. Binding to the corresponding receptors (CD30, CD40 or BAFF-R/BR3) results in activation and accumulation NF-κB-inducing kinase (NIK), which in turn activates IKKα, the kinase that promotes the processing of p100 into the active p52 isoform, thereby resulting in continuous activation of p52/p50, RelB/p50 or RelB/p52 heterodimers in the nucleus [27, 160, 161]. Pham L.V. et al. recently reported that NIK kinase is overexpressed and accumulates in both GCB-like and ABC-like DLBCL cell lines . NIK activation is usually tightly controlled through negative feedback mechanisms involving negative regulation by the adaptor/regulator proteins TNF receptor-associated factor 2 and 3 (TRAF2/3) and the cellular inhibitors of apoptosis ubiquitin ligases (c-IAP1/2) [27, 160, 161]. CD30, CD40 and BR3 receptors have been suggested to form a multimeric complex with TRAF3, TRAF2, TRAF5 c-IAP1, and c-IAP2 in DLBCL cells [27, 160, 161]. Both TRAF2 and TRAF3 serve as negative regulators of non-canonical NF-κB signaling pathways and target NIK for constant ubiquitination and degradation . Loss of this quaternary inhibitory complex can lead to increased NIK protein accumulation and constitutive activation of the non-canonical NF-κB signaling pathway . Indeed, 10 % of DLBCL cases demonstrate nuclear NF-κB activity exclusively for the non-canonical pathway (indicated by nuclear staining of p52 but not p50) while 20 % of DLBCLs display nuclear staining for both p50 and p52 , strongly indicating that the concurrent activation of both canonical and non-canonical NF-κB pathways occurs in a large fraction of DLBCL [18, 27, 160]. In line with these observation, recurrent loss of function mutations and deletions were recently revealed in genes encoding TRAF2 and/or TRAF3 in DLBCL [12, 15, 16, 19, 26, 27, 161]. Zhang B. et al. demonstrated that biallelic or monoallelic deletions/mutations of TRAF3 occur recurrently in roughly 15 % of ABC-DLBCL and GCB-DLBCL (in similar fractions) and correlate with non-canonical NF-κB activity in ABC-DLBCL cases . Modeling these genetic events in mice, Zhang B. et al. demonstrated a key oncogenic role for the non-canonical NF-κB pathways in DLBCL pathogenesis . Most DLBCL tumors developed in their mice model resembled ABC-DLBCL . Thus, NIK appears to be an attractive new therapeutic target for ABC-DLBCL treatment, particularly for patients with ABC-DLBCL that are refractory to bortezomib or to the BCR pathway inhibitor ibrutinib. Of interest, proteasome inhibitors such as bortezomib or carfilzomib, can also block the constant ubiquitination and degradation of NIK, thereby upregulating the non-canonical NF-κB signaling pathways. In addition, targeting both arms of NF-κB signaling may also improve the therapeutic outcome in patients with newly diagnosed high-risk DLBCL displaying mutations in both canonical and non-canonical NF-κB pathways [12, 18, 19, 27, 161]. Dual targeting of NF-κB pathways has been successfully demonstrated for multiple myeloma in vitro and in a xenograft model [277, 278].
Combination therapy simultaneously targeting NIK and IKKβ (as a main kinase of the canonical NF-κB pathway), either using the selective NIK inhibitors (AM-0216 or AM-0561) and a small molecule IKKβ inhibitor (MLX)  or the promising dual inhibitor of NIK and IKKβ, PBS-1086 , showed significant anti-multiple myeloma activity, associated with apoptosis and inhibition of both NF-κB pathways in tumor cells in vitro [277, 278] and in a mouse xenograft model of human multiple myeloma . To our best knowledge, there are no clinical trial studies ongoing, which evaluate the safety and efficacy of NIK inhibitors in patients with newly diagnosed or relapsed/refractory DLBCL.
Inhibition of NF-κB signaling and reactivation of a lethal type I interferon response in the BCR-subtype of GCB and ABC-DLBCL by targeting cereblon
Recent preclinical study demonstrated that the thalidomide-like drug lenalidomide is preferentially suppressing the proliferation and survival of ABC-DLBCL subtypes with minimal effects on non- ABC-DLBCL [90, 91]. Thalidomide-like immunomodulatory agents such as lenalidomide or pomalidomide, are clinically important drugs for multiple myeloma and other B-cell malignancies [279–281]. The activity of lenalidomide in ABC-DLBCL has at least two postulated mechanisms: inhibition of BCR-mediated NF-κB-dependent pro-survival signaling pathways in and expression of trancription factor IRF4, which in turn leads to the upregulation of the STAT2/type I interferon death pathway [90, 91]. IRF4 overexpression has been shown to enhance NF-κB activation and BCR signaling [90, 91]. The lenalidomide-mediated reduction of IRF4 requires the E3 ubiquitin ligase complex coreceptor protein cereblon (CRBN) [90, 91]. CRBN a substrate receptor of the Cul4-Rbx1-DDB1-CRBN E3 ubiquitin ligase complex, is a direct target of the immunomodulatory drugs thalidomide, lenalidomide and pomalidomide [282, 283]. Thalidomide-like drugs directly bind to CRBN and promote the recruitment of its common substrates such as transcription factors Aiolos and Ikaros to the E3 ubiquitin ligase complex, thus leading to substrate ubiquitinylation and degradation  and subsequent repression of IRF4 and SPIB [90, 91]. Repression of IRF4 and SPIB by lenalidomide induces a lethal type I interferon response in ABC-DLBCL by augmenting interferon β (IFNβ) production . IRF4 and its regulatory partner SPIB prevent IFNβ production by repressing IRF7 in ABC-DLBCLs . The STAT2/type I interferon (IFNα/β) axis is well known to have a tumor suppressor function in B-cell lymphoma in vitro [285, 286] and inhibits tumor growth in vivo . Loss of the STAT2-IFNα/β axis confers resistance to apoptosis induced by chemotherapeutic drugs in B-cell lymphoma cell lines [285, 286]. However, due to their high toxicities, IFNα and -β have not yet been accepted as clinically useful agents in patients with aggressive B-cell lymphoma.
Multiple phase I/II and phase II clinical trial studies revealed that lenalidomide is well tolerated and produces already as single agent durable responses in patients with aggressive relapsed/refractory ABC-DLBCL, leading to an overall response rate (ORR) of up to 53 % and a complete response rate (CR) of up to 23 % in non-GCB-DLBCL (including ABC-DLBCL cases) (Additional file 1: Table S2) [288–293]. In line with the reported efficacy of bortezomide and ibrutinib for non-GCB-DLBCL, patients with non-GCB-DLBCL showed a higher response to lenalidomide in relapsed/refractory DLBCL (ORR 52.9 %) when compared to patients with GCB-DLBCL (ORR 8.7 %) (Additional file 1: Table S2) . In an additional separate ongoing multicenter, randomized clinical phase II/III study, patients with refractory ABC-DLBCL treated with lenalidomide, when compared to GCB patients, showed greater improvements in ORR (45.5 % vs. 21.4 %), PFS (82 weeks vs. 13.2 weeks) and OS (108.4 weeks vs. 30 weeks)  (Additional file 1: Table S2). Recent phase I/II clinical trial studies have demonstrated that the combination of lenalidomide with R-CHOP is safe and efficacious, particularly in elderly patients [291, 295–299] (Additional file 1: Table S5). Several randomized phase III studies evaluating the use of lenalidomide with or without R-CHOP in patients with newly diagnosed DLBCL as well as in patients with relapsed/refractory DLBCL are currently ongoing (NCT01122472 (REMARC), NCT02285062 (ROBUST), NCT02128061, NCT01197560)  (Table 9 and Additional file 1: Table S2).
A recent study performed by Hagner P.R. et al. demonstrated that CC-122, a novel immunomodulatory agent-like thalidomide analog, directly binds to CRBN and promotes ubiquitinylation and degradation of Aiolos and Ikaros in DLBCL in vitro, in vivo and in patients with relapsed/refractory DLBCL, resulting in a mimicry of lethal IFN type I signaling through direct de-repression of interferon-stimulated gene (ISGs) transcription and induction of interferon inducible proteins, and ultimately leading to apoptosis in DLBCL . Surprisingly, CC-122 emerges with features that differentiate it from family member of thalidomide analogs. The anti-lymphoma activity of CC-122 was independent of the cell of origin and observed in both ABC- and GCB-DLBCL cell lines, in contrast to the ABC-subtype selective activity of lenalidomide . CC-122 has therefore been suggested to belong to a new class of drugs: pleiotropic pathway modifiers [300, 301]. These novel properties make CC-122 potentially clinically active in the GCB- subtype of DLBCL in which its predecessor, lenalidomide, has only limited or even no activity .
At least three possibilities have been suggested to explain the differential activity of CC-122 and lenalidomide [300, 301]. First, CC-122 may promote the recruitment, ubiquitination and degradation of specific and unique substrates to mediate some of its biological effects distinct from lenalidomide . Secondly, Aiolos and Ikarus, both known co-repressors of ISG transcription may act independently of IRF4 and interferon secretion in GCB- and type-3 DLBCL . Thirdly, CC-122 may promote the upregulation of the STAT2/type I interferon death pathway independently of IRF4 in GCB-DLBCL . Moreover, other potential immunomodulatory mechanisms for its activity in (GCB)-DLBCL likely do exist and may impact the nonimmune environment in vivo, in patients as well . CC-122 has already demonstrated clinical activity as single-agent in DLBCL [300–302, 303]. CC-122 is currently in phase I trials in patients with newly diagnosed DLBCL or relapsed/refractory DLBCL, either as a single-agent (NCT01421524) [300–302, 303] (Additional file 1: Table S2) or in combination with the novel dual mTORC1/mTORC2 inhibitor CC-223 , the novel BTK inhibitor CC-293  and/or rituximab (NCT02031419) as well as in combination with obinutuzumab, (NCT02417285)  (Additional file 1: Tables S5 and S14).
Of interest, Shi C.X. et al. recently demonstrated that proteasome inhibitors such as bortezomib and carfilzomib can block Ikaros degradation by lenalidomide in multiple myeloma, when concomitantly added to the lenalidomide treatment . These data suggest that administration of thalidomide-like agents concurrent with or shortly after proteasome inhibitor administration might be ineffective or at least strongly reduce the efficacy of thalidomide-like agents in DLBCL.
Inhibition of JAK2/STAT3 in ABC-DLBCL
The JAK/STAT3 signaling pathway represents another potential therapeutic drug target for relapsed or refractory ABC-DLBCL. Constitutive STAT3 activation has been recently correlated with poor overall survival in patients with ABC-DLBCL subtype treated with R-CHOP [307–310]. Inhibition of constitutive STAT3 activity sensitizes resistant B-cell NHL cells to chemotherapeutic cytotoxic drugs, including CHOP, cisplatin, fludarabine, adriamycin, and vinblastine [164, 171]. STAT3 is persistently phosphorylated (pSTAT3-Y705) in most ABC-DLBCL in an autocrine and paracrine manner (from the tumor microenvironment) [311–313]. Inactivating STAT3 in ABC-DLBCL cells inhibits cell proliferation and triggers apoptosis in vitro [312–314]. Small molecule inhibitors of STAT3 signaling (inhibitors of nuclear translocation or JAKs) are currently under investigation whether they could serve as drugs for relapsed and/or refractory ABC-DLBCL [171, 311, 315] (Additional file 1: Table S6). A phase I/II is currently being performed in patients with advanced tumors, including refractory DLBCL, evaluating the clinical efficacy and safety of ISIS-STAT3Rx, an antisense oligonucleotide, which inhibits nuclear translocation of STAT3 (NCT01563302). Clinical grade oral inhibitors of JAK1 and JAK2, such as fedratinib (SAR302503/TG101348) or ruxolitinib, which blocks phosphorylation of STAT1 and STAT3  have been recently proposed for clinical evaluation for the treatment of ABC-DLBCL [60, 316, 317]. A multicentre phase II study of ruxolitinib in patients with relapsed/refractory DLBCL is ongoing (NCT01431209) .
Moreover, a phase I study evaluating the safety and efficacy of the novel JAK1 inhibitor INCB039110  has been recently started in relapsed/refractory B-cell lymphoma, including DLBCL (NCT01905813) (Additional file 1: Table S6). In addition, the novel macrocyclic pyrimidine-based selective oral inhibitor of JAK2/JAK2(V617F) and FLT3 kinases, pacritinib (SB1518), which blocks phosphorylation of STAT1, STAT3 and STAT5 has also been suggested for further investigations in clinical studies of patients with relapsed/refractory DLBCL [317, 319, 320] (Additional file 1: Table S6). A phase I dose-finding and pharmacokinetic/pharmacodynamic study of pacritinib (SB1518) has shown safety and early clinical activity in patients with relapsed B-cell lymphoma, providing the first proof of principle of the potential clinical value of targeting JAK/STAT pathway in B-cell lymphoma [317, 321]. Unfortunately, no responses were observed in the five patients with relapsed/refractory DLBCL, which was explained by the small number of patients [317, 321] (Additional file 1: Table S6). To date, pacritinib (SB1518) is the first and only JAK2 inhibitor that has been already evaluated in patients with relapsed/refractory DLBCL .
HDAC inhibitors can also enhance dephosphorylation of STAT3 and are evaluated in ongoing clinical trials in DLBCL, including relapsed/refractory DLBCL (see next sections). Moreover, a recent study provided evidence that STAT3 mediated proliferation and survival of DLBCLs also depends on IL10/IL10-receptor signaling [322, 323], suggesting IL10-receptor (IL10R) as a novel JAK2/STAT3 pathway-specific therapeutic target in DLBCLs . Inhibition of IL10R signaling with an anti-IL10R-blocking antibody induced dose-dependent cell death in all tested ABC-DLBCL cell lines and primary DLBCLs [322, 323]. Anti-IL10R treatment resulted in interruption of the IL10/IL10R-STAT3 auto-stimulatory loop .
Inhibition of PI3K/AKT/mTORC1 and PI3K/mTORC2/PKC/AKT pathways in GCB-DLBCL and BCR-subtype of ABC-DLBCL
The constitutive activation of the PI3K/AKT/mTORC1 pathway in GCB-DLBCL plays a central role in promoting survival and chemotherapy-resistance and represents a rational therapeutic target in relapsed or refractory GCB-DLBCL . Deregulation of the PI3K/AKT/mTORC1 pathway by the inactivation of PTEN, an inhibitor of the PI3K/AKT/mTORC1 pathway, is found in 55 % of GCB-DLBCL cases, but only in 14 % of non-GCB-DLBCL and worsens prognosis . In preclinical in vitro studies, inhibitors of PI3K, such as LY294002 selectively targeted PTEN- deficient GCB-DLBCL cells [324, 325]. In addition, inhibition of target of rapamycin complex 1 (mTORC1) or PI3K blocks proliferation and induces cell death in BCR-subtype of ABC-DLBCL [133, 232, 233]. Idelalisib (formerly GS-1101 and CAL-101), a selective oral reversible inhibitor of the p110δ isoform of PI3K, is currently evaluated in an ongoing early phase I study as a single-agent in patients with relapsed/refractory DLBCL. Moreover, an ongoing early dose escalation and dose expansion phase I study is evaluating the safety and efficacy of idelalisib in combination with the novel BTK inhibitor ONO-4059 in patients with relapsed/refractory ABC-DLBCL (Additional file 1: Table S14). In addition, MK-2206, an AKT inhibitor and BKM-120, a pan-class I PI3K inhibitor, are currently being tested in early clinical phase I trials in DLBCL, including relapsed/refractory DLBCLs (Additional file 1: Table S2).
However, new drugs targeting the PI3K/AKT/mTORC1 pathway appears to have only modest activities as a single-agent in treating patients with relapsed/refractory DLBCL and many patients experience severe side effects [326–328]. For instance, recent phase II trial studies of the oral mTORC1 inhibitors everolimus (RAD001) and temsirolimus, two analogues of the parental compound rapamycin, showed a very modest ORR of 30 to 38 % and CR of only 12 % for DLBCL [326–328] (Additional file 1: Tables S2 and S5). An ongoing randomized clinical phase III study is further evaluating everolimus in patients with relapsed/refractory DLBCL (NCT00790036) (Table 9). The modest activity observed in these clinical studies has been explained in two ways: First, blockade of PI3K/AKT/mTORC1 pathway induces autophagy [329, 330], which can serve as a protective mechanism to mitigate the cytotoxicity of drugs targeting the PI3K/AKT/mTORC1 pathway in DLBCL cells . Autophagy can also serve as a protective mechanism to survive from chemotherapeutic-induced genotoxic stress . Inhibition of autophagy has been shown to enhance chemotherapy-induced cell death  and enhance the toxic activity of drugs targeting the PI3K/AKT/mTORC1 pathway in DLBCL cells . Secondly, the weak activity of rapamycin analogues can also be explained by their mTORC1-selective inhibitor activity. Both everolimus and temsirolimus target only the mTORC1 but not mTORC2. mTORC2 is generally considered to be unaffected by rapamycin and produces resistance at least partly via the induction of upstream receptor tyrosine kinase signaling and phosphorylation of AKT on S473, a critical regulatory site that stimulates maximal activity of this important survival kinase [332–334]. Thus, it is hypothesized that dual mTOR kinase inhibitors, blocking both PI3K/AKT/mTORC1 and PI3K/TORC2/PKC/AKT signaling pathways to prevent feedback loops, may have expanded therapeutic potential . Pre-clinical studies have already demonstrated that dual inhibition of mTORC1/2 can overcome rapamycin and/or temsirolimus resistance in solid cancer types . An ongoing phase I/II, multi-center study evaluating the safety and efficacy of the novel dual mTORC1/mTORC2 inhibitor CC-223  in patients with relapsed/refractory tumors, including DLBCLs, is currently testing this hypothesis (NCT01177397) . A preclinical study performed by Mortensen D.S. et al. provided preliminary evidence that CC-223 can strongly inhibit the growth of GCB-, ABC- and type-3 DLBCL cell lines associated with high mTORC1 and mTORC2 activity in vitro . Of interest, these data suggest that ABC-DLBCL with high IRF4 tend to be less sensitive towards CC-223 . In addition, a phase I study evaluating the efficacy and safety of the dual mTORC1/2 inhibitor OSI-027 in patients with solid cancer and B-cell lymphoma, including DLBCL has been recently completed and is pending announcement of the results (NCT00698243) . OSI-027 is a novel, highly selective, dual mTORC1/2 inhibitor that inhibits the phosphorylation of mTORC1 and mTORC2 . A previous preclinical study showed that OSI-027 markedly diminished proliferation and induced apoptosis in a variety of lymphoid cell lines and induced tumor regressions in B-cell lymphoma xenograft models . Moreover, using in vitro screening, Ezell S.A. et al. recently demonstrated that the combination of ibrutinib and AZD2014, a novel dual catalytic inhibitor of mTORC1/mTORC2, is highly synergistic in killing ABC-subtype DLBCL cell lines, weakly expressing IRF4 . Simultaneous inhibition of BTK and mTORC1/2 caused apoptosis both in vitro and in vivo and resulted in tumor regression in a xenograft model .
Taken together, despite their modest activity as single-agents both everolimus and temsirolimus might be targeted as a clinical strategy for re-sensitization to (R-)CHOP based chemotherapy [329, 337, 338]. Ongoing clinical phase I/II studies are evaluating the safety and activity of salvage therapy consisting of the oral mTORC1 inhibitors everolimus and temsirolimus, added to standard therapy of rituximab or R-CHOP, respectively, in patients with newly diagnosed or relapsed/refractory DLBCL (Additional file 1: Tables S4 and S5).
Inhibition of programmed death-1 (PD-1) signaling in (HR-like)-subtypes of ABC-DLBCL
Programmed death 1 (PD-1) is an inhibitory receptor expressed on the surface of T cells that functions in conjunction with receptor ligands, PD-L1 and PD-L2 to physiologically limit T-cell activation and proliferation . Its ligands, PD-L1 and PD-L2, are expressed on antigen-presenting cells . Binding of PD-L1 or PD-L2 to its receptor inhibits T-cell activation and counterbalances T-cell stimulatory signals, thus primarily limits the T-cell response in peripheral tissues . The sustained expression of PD-1 and the receptor ligands result in T-cell exhaustion and immune escape [339, 340]. This mechanism has been adopted by tumors to prevent antitumor activity in tumor-infiltrating lymphocytes that are present in the tumor microenvironment .
The PD-1/PD-L1 pathway plays an important role in tumor immune evasion . PD-L1 expression is either driven by direct oncogenic signaling or upregulated on the tumor cell surface via induction by IFNγ or other inflammatory cytokines, as occurs in the course of the normal immune response . IFNγ/cytokine induced expression of PD-L1 is mainly mediated through JAK2-STAT1 and/or STAT3 respectively [341–343]. PD-L1 is aberrantly overexpressed in subsets of aggressive GCB- and ABC-DLBCL (10–14 % of DLBCL-NOS) with worse prognosis, most likely belonging to the HR-subtype of ABC-DLBCL [344–348]. A recent phase II study of the anti-PD-1 antibody pidilizumab (NCT00532259), administered to patients after ASCT for relapsed/refractory DLBCL demonstrated an overall response rate of 51 % in patients with DLBCL  (Additional file 1: Table S2). 34 % of patients who had residual disease after ASCT experienced a complete response . The 16-month progression-free survival was 72 % in the population as a whole and 70 % in high-risk patients . These data suggest that PD-1 is a very promising target in the treatment and management of relapsed/refractory DLBCL. A phase II clinical trial is currently ongoing to evaluate the role of the anti-PD-1 antibody nivolumab in relapsed/refractory DLBCL  (Additional file 1: Table S2). There are also efforts to combine anti-PD1 agents with other drugs  (Additional file 1: Table S2). For instance, a phase I/II clinical trial evaluating the efficacy and safety of the anti-PD-1 antibody MEDI4736 in combination with ibrutinib in patients with relapsed/refractory DLBCL is currently ongoing (Additional file 1: Table S2).
Inhibition of EZH2 in GCB-DLBCL
The polycomb-group oncogene product enhancer of zeste homologue 2 (EZH2) is a histone methyltransferase and plays a key role in transcriptional repression through chromatin remodeling . The EZH2Y641F has now been reported as a gain-of-function mutation in > 21 % of GCB-DLBCL and is essentially absent from ABC-DLBCL . The Y641F mutation in EZH2 results in altered histone-lysine methyltransferase activity [351, 352]. The EZH2Y641F mutation can cooperate with c-MYC to accelerate lymphomagenesis in animal models and is implicated in drug resistance . In addition, EZH2 cooperates with BCL2 and BCL6 to create the GCB phenotype and induce B-cell lymphomas through formation and repression of bivalent chromatin domains [77, 79]. Several recent preclinical studies demonstrated that potent and selective S-adenosyl-methionine-competitive small molecule inhibitors of EZH2 such as E7438 (EPZ-6438), GSK-126 or CPI-360 eliminate tumor growth in GCB-DLBCL models with activating EZH2 mutations [77, 354–356]. GSK-126 is selectively targeting the activating oncogenic mutant form of EHZ2 . GSK-126 affected the viability of mutant EZH2-containing GCB-DLBCL cells in vitro and in mouse xenograft models with EZH2 mutations in vivo but not of wild-type (WT) EZH2-containing GCB-DLBCL cells or in mouse WT-EZH2 xenograft models . On the other hand inhibitors such as CPI-360 are broadly efficacious also in GCB-DLBCL models with wild-type EZH2 . Thus pharmacological inhibition of EZH2 activity may provide a promising treatment for relapsed or refractory GCB-DLBCL overexpressing EZH2 wild-type and/or mutants. Moreover, a recent preclinical study provided evidence for synergistic anti-tumor activity of the EZH2 inhibitor E7438 (EPZ-6438) and glucocorticoid receptor agonists in models of GCB-DLBCL in vitro . A phase I/II clinical trial study of E7438 (EPZ-6438) in NHL including newly diagnosed DLBCL is currently ongoing (NCT01897571) [354, 357].
Inhibition of BCL2, BFL-1 and MCL1 in GCB- and ABC-DLBCL
Deregulation of members of the B-cell lymphoma (BCL)-2 family of pro- and anti-apoptotic proteins are associated with rituximab and/or chemotherapy resistance in DLBCL-NOS [358–363]. BCL2, BCL2-related factor (BFL)-1 and myeloid leukemia cell differentiation protein (MCL)-1 represent novel therapeutic targets for relapsed or refractory GCB- and/or ABC-DLBCL, respectively [360–364]. BCL2 is overexpressed in approximately 40–65 % of DLBCL tumors, owing to t(14;18)(q32;q21) translocations found in 15–30 % of cases, and through additional mechanisms that are not well defined [75, 107, 144, 145, 360, 362, 365, 366]. BCL2 is frequently overexpressed in both GCB- and ABC-DLBCL, albeit the mechanisms of BCL2 upregulation are different between GCB- and ABC-DLBCL [75, 362, 365]. ABC-DLBCLs overexpress MCL1 at significantly higher levels compared with GCB-DLBCL, showing IHC positivity in 50 % of ABC and 30 % of GCB tumors . Recent studies have suggested that overexpression of BCL2 remains a negative predictor of outcome after rituximab-based chemotherapy mainly in GCB-DLBCL [360, 361] while MCL1 mainly contributes to chemotherapy resistance in ABC-DLBCL . On the other hand, in presence of c-MYC overexpression, BCL2 overexpression also contributes to a decreased survival of ABC-DLBCL after rituximab-based chemotherapy .
Structure-based design was used for the development of small-molecule BH3 mimetics that bind to the BH3 hydrophobic-binding groove of the anti-apoptotic proteins BCL2, B-cell lymphoma-extra large (BCL-XL), BCL2-related protein A1 (BCL2A1/A1) and MCL1 and promote apoptosis . Small-molecule BH3 mimetics include the clinically relevant agents ABT-737, ABT-263 (navitoclax), ABT-199 and GX15-070 (obatoclax) [367–370]. ABT-737 and its oral derivative A263 bind to BCL2, BCL-W and BCL-XL, but not to MCL1, BFL1 or A1 [367, 369, 370], whereas GX15-070, a pan-BCL2 inhibitor also binds to and inactivates MCL1 [367, 368]. Preclinical studies indicate that ABT-737, ABT-263 and GX15-070 are effective against GCB- and/or ABC-DLBCL cells in vitro, including bortezomib-resistant DLBCL cells and substantially suppressed tumor growth in vivo [363, 371–373]. ABT-263 and GX15-070 have been suggested to be effective in patients with relapsed/refractory DLBCL [363, 371]. However, on-target BCL-XL inhibition by ABT-263 and GX15-070 led to dose-dependent thrombocytopenia and posed a barrier to maximizing the activity of these agents . Moreover, a recent preclinical study suggests that patients may eventually develop ABT-737-resistant disease by up-regulating the expression of MCL1 and BFL1 . ABT-199 (venetoclax), a second-generation orally available derivative of ABT-737 that selectively targets BCL2 is currently under evaluation in clinical trials of B-cell NHL [367, 374, 375]. ABT-199 has greater than 100-fold selectivity for BCL2 over BCL-XL [375, 376].
Preclinical and early clinical studies demonstrated that ABT-199 inhibits the growth of aggressive c-MYC-driven mouse B-cell lymphomas and human BCL2-dependent B-cell lymphoma tumors in vivo without causing thrombocytopenia [375, 377]. Of interest, a recent study provided preliminary evidence that normal, untransformed mature B cells may also be sensitive to ABT-199, both in vitro and in vivo . A preclinical study showed that single-agent ABT-199 had only modest antitumor activity against most DLBCL lines and resulted in compensatory upregulation of MCL1 expression . Moreover, in a phase I clinical trial study, used as a single-agent, ABT-199 has shown a modest overall response rate of up to 33 % in DLBCL, with a complete response rate of only up to 11 % [380–382]. On the other hand, treatment of high-risk DLBCL with ABT-199 combined with the potent new cyclin-dependent kinase inhibitor dinaciclib , which knocks down MCL1 by inhibiting CDK9 [379, 383], synergistically induced tumor regression, in xenografts and in a genetically accurate murine model of c-MYC/BCL2 double-hit B-cell lymphoma . A phase II study is currently ongoing combining ABT-199 with bendamustine and rituximab in relapsed/refractory NHL including relapsed/refractory DLBCL (NCT01594229) (Additional file 1: Table S5).
Inhibition of BCL6 in the BCR-subtype of GCB- and ABC-DLBCL
B-cell lymphoma protein BCL6 overexpression inhibits apoptosis induced by chemotherapeutic agents in DLBCL . BCL6 is overexpressed in both GCB- and ABC-DLBCL, albeit through different mechanisms . Recent studies demonstrated that HSP90 forms a complex with BCL6 and inhibition of HSP90 with the drug PU-H71, a purine scaffold HSP90 inhibitor destabilizes BCL6 and selectively kills BCL6-positive DLBCL cells in vitro and in vivo . Subsequent studies demonstrated that small molecule inhibitors, including the retro-inverted BCL6 peptide inhibitor (RI-BPI, 79–6) that directly antagonize BLC6 function by disrupting the BCL6-corepressor complexes via binding in the lateral groove of the BCL6 BTB domain and thereby selectively inhibiting the interaction with nuclear receptor co-repressor BCOR, NCOR1 and NCOR2 proteins [123, 385, 386]. The small-molecule inhibitor mediated disruption of the activity of BCL6, can be selectively toxic towards high-risk BCL6-dependent BCR-subtypes of GCB and ABC-DLBCL in vitro and potently suppressed GCB-DLBCL tumors in a DLBCL xenograft mouse model in vivo through reactivating pro-apoptotic genes repressed by BCL6 [123, 385, 386]. RI-BPI mediated inhibition of BCL6 also induces the expression of EP300, resulting in acetylation and activation of TP53 and concomitant acetylation and inactivation of HSP90 . Moreover the BCL6 activity can also be indirectly blocked in DLBCLs by pharmacologic inhibition of both HDACs and SIRT1/2 [387–389], see next sections. Together, BCL6 represents a novel promising therapeutic target in relapsed/refractory BCR-subtypes of GCB- and ABC-DLBCL. To our best knowledge, there are no clinical trial studies ongoing, which evaluate the safety and efficacy of HSP90 or BCL6 inhibitors in patients with newly diagnosed or relapsed/refractory DLBCL.
Inhibition of HDACs and Sirtuins in GCB- and ABC-DLBCL
Several recent studies identified small inhibitory molecules targeting histone deacetylases (HDACs) and sirtuins as promising potential therapeutic agents in relapsed/refractory GCB- and ABC-DLBCLs . SIRT1 expression is associated with poor prognosis in DLBCL . Several HDAC inhibitors (HDACi) are already approved for clinical use or in clinical trials . HDACi and sirtuin inhibitors can target both GCB- and ABC-DLBCL, albeit through different mechanisms [387, 392]. Various HDACi and sirtuin inhibitors can repress GCB-DLBCL as a result of their inhibition of the BCL6 oncogene [386–389]. Inhibition of both HDACs and SIRT1 results in the accumulation of acetylated BCL6 . Acetylation of BCL6 inhibits the ability of BCL6 to recruit HDAC-containing SMRT co-repressor complexes . Thus, inhibition of HDACs and Sirtuins in BCL6-positive GCB-DLBCLs (and to a minor extend in ABC-DLBCL) results in the accumulation of inactive acetylated BCL6 and eventually in cell cycle arrest and apoptosis [386, 388]. Moreover a recent preclinical and clinical study demonstrated that combined sirtuin and pan-HDAC inhibition synergistically kills DLBCLs with a preference for GCB-DLBCL . Combined treatment of DLBCL cells with HDACi such as vorinostat in combination with the Sirtuin inhibitor niacinamide produced synergistic cytotoxicity in vitro and in vivo by inhibiting BCL6 and activating TP53 . Acetylation of p53 strongly stimulates its pro-apoptotic activity . A subsequent proof-of-principle phase I clinical pilot trial in patients with relapsed or refractory NHL, including DLBCL led to an ORR of 18 % and CR of 18 % . 46 % of the patients experienced stabilization of their aggressive disease . In addition, a study performed by Gupta M. et al. demonstrated that HDACi such as LBH589 can effectively suppress STAT3 in ABC-DLBCL . Inhibition of HDACs leads to increased acetylation of STAT3, dephosphorylation of pSTAT3(Y705), nuclear export of STAT3 to the cytoplasm and blocks survival of ABC-DLBCL cells . Inhibition of SIRT1 has also been shown to induce dephosphorylation of pSTAT3(Y705), nuclear export of STAT3 to the cytoplasm and thereby inactivation of STAT3 . Preliminary data from a clinical phase II trial study indicate that HDACi might not work as single-agents in relapsed/refractory GCB and ABC-DLBCL . Despite an encouraging activity of the HDACi vorinostat in DLBCL was noted in a phase I trial study , subsequent clinical phase II trial studies of oral vorinostat in relapsed DLBCL showed only limited activity against relapsed DLBCL . Although vorinostat seems not to be very effective as a single-agent, other more potent pan-HDACi such as romidepsin, panobinostat, MGCD-0103, LBH589 have been suggested as rational therapeutic options for clinical trials in relapsed/refractory DLBCL when combined with other agents [1, 397].
Inhibition of BRD4 (and BRD2) in the c-MYC-driven subtype of DLBCL-NOS
High c-MYC expression correlates with inferior clinical outcome in R-CHOP-treated DLBCL patients [107, 138, 366]. C-MYC-driven gene (over)expression has been suggested to confer resistance to rituximab immunotherapy [107, 138, 366, 398]. Recent preclinical studies demonstrated that the transcriptional coactivator and bromodomain and extra terminal (BET) protein BRD4 is required for transcriptional amplification of the c-MYC oncogene [398–402]. BRD4 occupies a small set of exceptionally large super-enhancers associated with genes including the c-MYC oncogene [399, 403]. Inhibition of BRD4 (and other BRD family members) by small molecule inhibitors of the BET family, such as the BET-bromodomain inhibitor JQ1, leads to preferential inhibition of c-MYC oncogene expression, growth arrest and extensive apoptosis in a variety of B-cell leukemia and lymphoma cell lines, including c-MYC/BCL2-double-hit DLBCLs and AML cells that overexpress c-MYC in association with BCL2 [398–401, 404]. I-BET151, another novel highly selective inhibitor of both BRD2 and BRD4 causes transcriptional silencing of the c-MYC gene and c-MYC-dependent programs in myeloma cells by inhibition of BRD2 and BRD4 binding to the promoter of the c-MYC gene and failure to recruit P-TEFb and PAFc1 complexes to the IGH/c-MYC enhancer by BRD2 and BRD4, and lack of subsequent RNA-Pol-II recruitment . Both JQ1 and PFI-1, another highly selective inhibitor of BRD4 and BRD2, also displayed significant antitumor activities in vivo in xenograft models of DLBCL, Burkitt’s lymphoma or acute myeloid leukemia and thereby improved survival of engrafted mice [399–402, 406]. Another preclinical study recently demonstrated that the new BET bromodomain inhibitor OTX015 affects pathogenetic pathways in preclinical B-cell tumor models, including GCB-, ABC-and type-3 DLBCL-NOS . OTX015 showed strong anti-proliferative activity in a large panel of cell lines derived from mature B-cell lymphoid tumors . Interestingly, in addition to its broad cytostatic activity, OTX015 selectively induced apoptosis in a genetically defined subgroup of cells, derived from ABC-DLBCL, bearing wild-type TP53 and mutations in MYD88, CD79B and/or CARD11 . OTX015 targets and inhibits canonical NF-κB, TLR and JAK/STAT3 signaling pathways, as well as c-MYC- and E2F1-regulated genes in DLBCL in vitro and in vivo . As already mentioned above, inhibition of BRD2 and BRD4 by CPI203 and JQ1 could also inhibit the oncogenic NF-κB activity and kill ABC-DLBCL cells . Surprisingly, this effect seems to be independent of c-MYC since ectopic provision of c-MYC did not rescue ABC-DLBCL cells from JQ1 toxicity . Remarkably, Eμ-Brd2 transgenic mice developed predominately ABC-like DLBCLs . Confirming previous preclinical studies [398, 399], Boi M. et al. also showed that BET bromodomain inhibition by OTX015 increases rituximab sensitivity in DLBCL cells . At least four small-molecule bromodomain inhibitors of BET are in ongoing oncology/hematology early phase I clinical studies (CPI-0610, NCT01949883; GSK525762, NCT01587703; OTX015, NCT01713582 and TEN-010, NCT01987362), which include relapsed/refractory DLBCL (CPI-0610; NCT01949883) (Additional file 1: Table S2). The first results from a phase I study with the orally available BET bromodomain inhibitor OTX015 have been reported with clinical responses in both leukemia and B-cell lymphoma patients in the absence of major toxicities [409, 410].
Of interest, a recent study performed by Lu J. et al. showed that JQ1 and OTX015 can lead to BRD4 protein accumulation over time in Burkitt lymphoma (BL) cells and incomplete c-MYC suppression in vitro . Whether these effects may also occur in DLBCL remain to be investigated. Remarkably, three recent studies provided a novel strategy, which can circumvent these limitations by generating bifunctional phthalimide or VHL-ligand-conjugated versions of JQ1 and OTX015 [411–413]. Lu J. and colleagues designed a hetero-bifunctional proteolysis targeting chimera (PROTAC), ARV-825, by connecting the small-molecule BRD4 binding moiety OTX015 to the E3 ligase cereblon binding moiety of pomalidomide that recruits BRD4 and BRD2 to the E3 ubiquitin ligase cereblon, leading to fast, efficient, and prolonged degradation of BRD4 and BRD2, effective suppression of c-MYC signaling, inhibition of cell proliferation and apoptosis induction in BL in vitro . In the second study, Winter G.E. et al. generated a bifunctional thalidomide-conjugated version of JQ1, termed dBET . Treatment of acute myeloid leukemia (AML) cells with dBET1 induced highly selective cereblon-dependent protein degradation of BET family members in vitro and in vivo, resulted in transcriptional downregulation of MYC, induction of antiproliferative responses in leukemia cells in vitro and delayed proliferation and leukemia progression in mice, without toxicity, thus underscoring the potential clinical utility of this approach . Moreover, treatment with dBET1 or ARV-825 induced a superior apoptotic response compared with JQ1 or OTX015, respectively in primary AML or BL cells . Pharmacologic destabilization of BRD4 in vivo also resulted in improved anti-tumor efficacy in a human leukemia xenograft compared to JQ1, highlighting the potential superiority of BET degradation over BET bromodomain inhibition . Moreover a third study using a BET-specific PROTAC, termed MZ1, that tether JQ1 to a ligand for the E3 ubiquitin ligase VHL, demonstrated preferential degradation of BRD4 over BRD2 and BRD3 at low concentrations and did not observe any degradation of JQ1-specific off-targets by MZ1, thus point to a more BRD4-selective pharmacological profile of BET specific PROTACs compared with pan-selective BET inhibitors JQ1 or OTX015 . Taken together, cereblon-based PROTACs may therefore provide a better and more efficient strategy in targeting BRD4 and BRD2 than traditional small-molecule inhibitors [411, 412]. This chemical strategy for controlling target protein stability of BRD proteins may also have broad implications for therapeutically targeting previously intractable proteins in DLBCL .
Inhibition of PRPS2 in the c-MYC-driven subtype of DLBCL-NOS
Using a mouse model of c-MYC-driven B-cell lymphomagenesis, a recent study uncovered the mechanism by which c-MYC coordinates the nexus between nucleotide metabolism and protein biosynthesis. The authors found that the single rate-limiting enzyme, phosphoribosyl-pyrophosphate synthetase 2 (PRPS2), promotes increased nucleotide biosynthesis in c-MYC-transformed cells . Remarkably the levels of PRPS2 are specifically increased in c-MYC-driven lymphomagenesis and this upregulation tightly correlates with eukaryotic translation initiation factor 4E (eIF4E) expression, which was also directly induced by c-MYC . Moreover, the authors also demonstrated that loss of PRPS2 in the Prps2 knockout mouse background is synthetically lethal in c-MYC-transformed human and mouse cell lines, but knockout of Prps2 did not affect wild-type cells or mice . Depletion of PRPS2 levels by siRNA in c-MYC-driven B-cell lymphomas improved survival and induced complete tumor regression in 30 % of mice, strongly indicating that protein and nucleotide biosynthesis controlled by PRPS2 is crucial for c-MYC-driven tumorigenesis . Together, PRPS2 might be a promising and effective druggable target in c-MYC-driven subtype of DLBCL-NOS.
Reactivation of the pro-apoptotic TGF-β-SMAD pathway through inhibition of DMNTs in relapsed/refractory GCB and ABC-DLBCL-NOS
Several recent studies identified the transforming growth factor-β (TGF-β)-SMAD pathway as a critical target in relapsed/refractory DLBCL [415–418]. By profiling genome-wide DNA methylation at single-base pair resolution in thirteen DLBCL diagnosis-relapse sample pairs and in a GCB-DLBCL cell line, Pan H. et al. identified a relapse-associated DNA methylation signature based on consistently differentially methylated regulatory elements between diagnosis and relapsed pairs . This signature was linked with specific genes and pathways, including the pro-apoptotic TGF-β-receptor-SMAD pathway suggested to play an important role in relapse of DLBCL .
These data confirm a previous study indicating that methylation aberrations of TGF-β receptor activity pathway-associated genes might be involved in relapse and chemoresistance in DLBCL . Pan H. et al. demonstrated that prolonged exposure to low-dose DNMT inhibitors (DNMTi) reprogrammed chemoresistant GCB- and ABC-DLBCL cells to become doxorubicin sensitive in vivo . Recurrent hypermethylation of the promoter region and reactivation of SMAD1 was a critical contributor and required for chemosensitization . A subsequent phase I clinical pilot study evaluating the priming by DNMT inhibitor azacytidine (AZA) followed by standard R-CHOP in high-risk patients with DLBCL showed a very high rate of complete remission (92 %) and confirmed SMAD1 demethylation and chemosensitization . AZA and 5-aza-2′-deoxycytidine/decitabine (5-AZA/DAC) mainly inhibit DNA methyltransferases DMNT1 and DMNT3 resulting in the re-expression of tumor-suppressor genes [419, 420]. Both studies are in line with a previous report demonstrating that escaping from TGF-β-SMAD5-mediated growth inhibition through microRNA-155-mediated inhibition of SMAD5 is critical to relapse of DLBCL [415, 416]. Together these studies delineate a personalized therapeutic strategy for the clinical use of DNMT inhibitors as activator of the pro-apoptotic TGF-β receptor-SMAD pathway in relapsed/refractory GCB- and ABC-DLBCL. Two recent phase I studies evaluating the efficacy and safety of decitabine in combination with the HDACi vorinostat or valproic acid in patients with relapsed/refractory B-cell lymphoma, including DLBCL has been recently completed and are pending announcement of the results (NCT00109824, NCT00275080) (Additional file 1: Table S14).